Job Description P0A7I4 Confidence 98.61% Date Thu Jan 5 11:05:43 GMT 2012 Rank 182 Aligned Residues 136 % Identity 15% Template c3l82B_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:f-box only protein 4; PDBTitle: x-ray crystal structure of trf1 and fbx4 complex Resolution 2.40 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	I	I	S	H	P	D	A	G	K	T	T	I	T	E	K	V	L	L	F	G	Q	A	I	Q	T	A	G	T	V	K	G	R	G	S	N	Q	H	A	K	S	D	W	M	E	M	E	K	Q	R	G	I	S	I	T	T	S	V	M	Q	F	P	Y	H	D	C	L	V	N	L	L	D	T	P	G	H	E	D	F
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		F	A	X	F	G	P	G	L	E	E	L	N	T	S	L	V	L	S	L	X	S	S	E	E	L	C	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	G	L	P	Q	R	Q	I	D	G	I	G	S	G	V	N	F	.	Q	L	N	N	Q	H	K	F
Template Known Secondary structure							G	G	G	T	S	S	S	S								T			S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G			T	T	S							.		S	S	S	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.																											.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.
		96								.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.							.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.																							.	.																	.	.	.	.	.	.									.
Query SS confidence			.	.	.	.	.	.	.																							.	.																	.	.	.	.	.	.									.
Query Sequence		S	.	.	.	.	.	.	.	E	D	T	Y	R	T	L	T	A	V	D	C	C	L	M	V	I	D	A	A	K	G	.	.	V	E	D	R	T	R	K	L	M	E	V	T	R	L	R	D	.	.	.	.	.	.	T	P	I	L	T	F	M	N	.	K	L	D	R	D	I	R	D	P	M	E	L	L	D	E	V	E
Query Conservation			.	.	.	.	.	.	.																							.	.																	.	.	.	.	.	.									.
Alig confidence			.	.	.	.	.	.	.																							.	.																	.	.	.	.	.	.									.								.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		N	I	L	I	L	Y	S	T	P	Q	I	Q	K	V	C	E	V	V	D	G	F	I	Y	V	A	N	A	E	A	H	K	R	H	E	W	Q	D	E	F	S	H	I	X	A	X	T	D	P	A	F	G	S	S	G	R	P	L	L	V	L	S	C	I	S	Q	G	D	V	K	R	.	.	.	X	P	C	F	Y	L	A
Template Known Secondary structure							S													S									B	T	T																S		T	T	S	S		S		S									S	S	T	T	S		B	.	.	.
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	L	K	I	G	C	A	P	I	T	W	P	I	G	C	G	K	L	F	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	E	L	H	L	N	L	L	N	H	P	W	L	V	Q	D	T	E	A	E	T	L
Template Known Secondary structure				T	T	G	G	G	G		S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions