Job Description P0A7I4 Confidence 97.87% Date Thu Jan 5 11:05:43 GMT 2012 Rank 279 Aligned Residues 146 % Identity 16% Template c3l2oB_ PDB info PDB header:protein binding/cell cycle Chain: B: PDB Molecule:f-box only protein 4; PDBTitle: structure-based mechanism of dimerization-dependent ubiquitination by2 the scffbx4 ubiquitin ligase Resolution 2.80 Å

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		16	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.
Predicted Secondary structure									.																																																																		.	.	.
Query SS confidence									.																																																																		.	.	.
Query Sequence		F	A	I	I	S	H	P	.	D	A	G	K	T	T	I	T	E	K	V	L	L	F	G	Q	A	I	Q	T	A	G	T	V	K	G	R	G	S	N	Q	H	A	K	S	D	W	M	E	M	E	K	Q	R	G	I	S	I	T	T	S	V	M	Q	F	P	Y	H	D	C	L	V	N	L	L	.	.	.	D	T	P	G
Query Conservation									.																																																																		.	.	.
Alig confidence									.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	M	F	G	P	G	L	E	E	L	N	T	S	L	V	L	S	L	M	S	S	E	E	L	C	P	T	A	G	L	P	Q	R	Q	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	G	S	G	V	N	F	Q	L	N	N	Q	H	K	F	N	I	L	I	L	Y	S	T	T	R
Template Known Secondary structure							T					S	S	S							T	T		G	G	G							S	T	T	T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S									T	T	T									S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.																		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																															.	.	.														.	.	.	.	.										.
Query SS confidence																															.	.	.														.	.	.	.	.										.
Query Sequence		H	E	D	F	S	E	D	T	Y	R	T	L	T	A	V	D	C	C	L	M	V	I	D	A	A	K	G	V	E	.	.	.	D	R	T	R	K	L	M	E	V	T	R	L	R	.	.	.	.	.	D	T	P	I	L	T	F	M	N	.	K	L	D	R	D	I	R	D	P	M	E	L	L	D	E	V	E	N	E	L
Query Conservation																															.	.	.														.	.	.	.	.										.
Alig confidence																															.	.	.														.	.	.	.	.										.								.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		R	Y	S	V	I	P	Q	I	Q	K	V	C	E	V	V	D	G	F	I	Y	V	A	N	A	E	A	H	K	R	H	E	W	Q	D	E	F	S	H	I	M	A	M	T	D	P	A	F	G	S	S	G	R	P	L	L	V	L	S	C	I	S	Q	G	D	V	K	R	.	.	.	M	P	C	F	Y	L	A	H	E	L
Template Known Secondary structure																	S							B		B	T	T																							T	T										S	S	T	T	S		B	.	.	.										T
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.				.	340	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	G	C	A	P	I	T	W	P	I	G	C	G	K	L	F	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	L	N	L	L	N	H	P	W	L	V	Q	D	T	E	A	E	T	L
Template Known Secondary structure		T	G	G	G	G		S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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