Job Description P0A7I4 Confidence 100.00% Date Thu Jan 5 11:05:43 GMT 2012 Rank 8 Aligned Residues 488 % Identity 20% Template c3b8hA_ PDB info PDB header:biosynthetic protein/transferase Chain: A: PDB Molecule:elongation factor 2; PDBTitle: structure of the eef2-exoa(e546a)-nad+ complex Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	P	Y	L	Q	E	V	A	K	R	R	T	F	A	I	I	S	H	P	D	A	G	K	T	T	I	T	E	K	V	L	L	F	G	Q	A	I	Q	T	A	G	T	V	K	G	R	G	S	N	Q	H	A	K	S	D	W	M	E	M	E	K	Q	R	G	I	S	I	T	T	S	V	M	Q	F	P	Y	H	D	C
Query Conservation
Alig confidence																																															.	.	.	.	.																						.	.	.
Template Conservation																																															.	.	.	.	.																						.	.	.
Template Sequence		M	R	S	L	M	D	K	V	T	N	V	R	N	M	S	V	I	A	H	V	D	H	G	K	S	T	L	T	D	S	L	V	Q	R	A	G	I	I	S	A	G	I	T	I	K	.	.	.	.	.	S	T	A	I	S	L	Y	S	E	M	S	D	E	D	V	K	E	I	K	Q	K	.	.	.	T	D	G	N	S	F
Template Known Secondary structure					T	T	S		G	G	G										G	G	G	T													B								B		.	.	.	.	.																			S	S		.	.	.			S	S
Template Predicted Secondary structure																																															.	.	.	.	.																						.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	N	L	L	D	T	P	G	H	E	D	F	S	E	D	T	Y	R	T	L	T	A	V	D	C	C	L	M	V	I	D	A	A	K	G	V	E	D	R	T	R	K	L	M	E	V	T	R	L	R	D	T	P	I	L	T	F	M	N	K	L	D	R	D	I	R	D	P	M	E	L	L	D	E	V	E	N	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	N	L	I	D	S	P	G	H	V	D	F	S	S	E	V	T	A	A	L	R	V	T	D	G	A	L	V	V	V	D	T	I	E	G	V	C	V	Q	T	E	T	V	L	R	Q	A	L	G	E	R	I	K	P	V	V	V	I	N	K	V	D	R	A	L	L	E	L	Q	V	S	K	E	D	L	Y	Q	T	F
Template Known Secondary structure										S	S	T	T											T		S								T	T	T	B	S														T	T																T	S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.																					.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	G	C	A	P	I	T	W	P	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	G	K	L	F	K	G	V	Y	H	L	Y	K	D	E	T	Y	L	Y	Q	S	G	K	G	H	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	T	V	E	S	V	N	V	I	V	S	T	Y	A	D	E	V	L	G	D	V	Q	V	Y	P	A	R	G	T	V	A	F	G	S	G	L	H	G	W	A	F	T	I	R	Q	F	A	T	R	Y	A	K	K	F	G	V	D	K	A	K	M	M	D	R	L	W	G	D	S	F	F	N	P	K	T	K	K	W	T
Template Known Secondary structure																S		G	G	G							G	G	G	T							T	T	T	T													T	T	T	T	T										S	S	S	S					T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.								.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																															.																			.	.	.	.	.	.	.
Query SS confidence																																															.																			.	.	.	.	.	.	.
Query Sequence		I	Q	E	V	R	I	V	K	G	L	N	N	P	D	L	D	A	A	V	G	E	D	L	A	Q	Q	L	R	D	E	L	E	L	V	K	G	A	S	N	E	F	D	K	E	L	.	F	L	A	G	E	I	T	P	V	F	F	G	T	A	L	G	N	F	.	.	.	.	.	.	.	G	V	D	H	M	L	D	G	L
Query Conservation																																															.																			.	.	.	.	.	.	.
Alig confidence																																															.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	K	D	T	D	A	E	G	K	P	L	E	R	A	F	N	M	F	I	L	D	P	I	F	R	L	F	T	A	I	M	N	F	K	K	D	E	I	P	V	L	L	E	K	L	E	I	V	L	K	G	D	E	K	D	L	E	G	K	A	L	L	K	V	V	M	R	K	F	L	P	A	A	D	A	L	L	E	M	I
Template Known Secondary structure		S		S	B		T	T	S		B			B						T													T	T		T	T									T	T					G	G	G	G	G															S	B
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.																	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Query Sequence		V	E	W	A	P	A	P	M	P	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	T	R	T	V	E	A	S	E	D	K	F	T	G	F	V	F	K	I	Q	A	N	M	D	P	K	H	R	D	R	.	V	A	F	M	R	V	V	S	G	K	Y	E	K	G	M	K	L	R	Q	V	R
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.							.
Template Conservation																																																			.	.	.
Template Sequence		V	L	H	L	P	S	P	V	T	A	Q	A	Y	R	A	E	Q	L	Y	E	G	P	A	D	D	A	N	C	I	A	I	K	N	C	D	P	K	A	D	L	M	L	Y	V	S	K	M	V	P	.	.	.	T	S	D	K	G	R	F	Y	A	F	G	R	V	F	A	G	T	V	K	S	G	Q	K	V	R	I	Q	G
Template Known Secondary structure					S															B	S	S		T	T	S								T	T		S	S	S	S											.	.	.	B	S	S	T	T											S				T	T
Template Predicted Secondary structure																																																			.	.	.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.				.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		336	.										.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.		.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.		.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.																																							.											.									.
Query SS confidence				.	.	.	.	.	.	.	.	.																																							.											.									.
Query Sequence		T	A	.	.	.	.	.	.	.	.	.	K	D	V	V	I	S	D	A	L	T	F	M	A	G	D	R	S	H	V	E	E	A	Y	P	G	D	I	L	G	L	H	N	H	G	T	I	Q	I	.	G	D	T	F	T	Q	G	E	M	M	.	K	F	T	G	I	P	N	F	.	A	P	E	L	F	R	R	I	R	L
Query Conservation				.	.	.	.	.	.	.	.	.																																							.											.									.
Alig confidence				.	.	.	.	.	.	.	.	.																																							.											.									.
Template Conservation
Template Sequence		P	N	Y	V	P	G	K	K	D	D	L	F	I	K	A	I	Q	R	V	V	L	M	M	G	R	F	V	E	P	I	D	D	C	P	A	G	N	I	I	G	L	V	G	I	D	Q	F	L	L	K	T	G	T	L	T	T	S	E	T	A	H	N	M	K	V	M	K	F	S	V	S	P	V	V	Q	V	A	V	E	V
Template Known Secondary structure		T	T			S	S	S		T	T							S							T	T						S				T	T							S		T	T	T		S	S						S		T	T				B	S
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.		.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		K	D	P	L	K	Q	K	Q	L	L	K	G	L	V	Q	L	S	E	E	G	A	V	Q	V	F	R	P	I	S	N	N	D	L	I	V	G	A	V	G	V	L	Q	F	D	V	V	V	A	R	L	K	S	E	Y	.	N	V	E	A	V	Y	E	S	V	N	V	A	T	A	R	W	V	E	C	A	D	A	K	K	F
Query Conservation																																																								.
Alig confidence																																																								.																			.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		K	N	A	N	D	L	P	K	L	V	E	G	L	K	R	L	S	K	S	D	P	C	V	L	T	Y	M	S	E	S	G	E	H	I	V	A	G	T	G	E	L	H	L	E	I	C	L	Q	D	L	E	H	D	H	A	G	V	P	L	K	I	S	P	P	V	V	A	Y	R	E	T	V	E	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	T	T	S																T	T							T	T								S	S														T	T	S		S																S	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	F	K	R	K	N	E	S	Q	L	A	L	D	G	G	D	N	L	A	Y	I	A	T	S	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	S	S	Q	T	A	L	S	K	S	P	N	K	H	N	R	I	Y	L	K	A	E	P	I	D
Template Known Secondary structure		S			S	S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.