Job Description P0A7I4 Confidence 97.29% Date Thu Jan 5 11:05:43 GMT 2012 Rank 332 Aligned Residues 79 % Identity 19% Template c2yc2D_ PDB info PDB header:transport protein Chain: D: PDB Molecule:small rab-related gtpase; PDBTitle: intraflagellar transport complex 25-27 from chlamydomonas Resolution 2.59 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.								.
Predicted Secondary structure																	.	.	.	.																																																						.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.																																																						.	.	.	.	.	.	.
Query Sequence		G	I	S	I	T	T	S	V	M	Q	F	P	Y	H	D	.	.	.	.	C	L	V	N	L	L	D	T	P	G	H	E	D	F	S	E	D	T	Y	R	T	L	T	A	V	D	C	C	L	M	V	I	D	A	A	K	G	V	E	D	R	T	R	K	L	M	E	V	T	R	L	R	D	.	.	.	.	.	.	.	T
Query Conservation																	.	.	.	.																																																						.	.	.	.	.	.	.
Alig confidence																	.	.	.	.																																																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	C	K	V	A	V	V	V	A	P	V	T	I	P	D	T	T	V	S	V	E	L	F	L	L	D	T	A	G	S	D	L	Y	K	E	Q	I	S	Q	Y	W	N	G	V	Y	Y	A	I	L	V	F	D	V	S	S	M	E	S	F	E	S	C	K	A	W	F	E	L	L	K	S	A	R	P	D	R	E	R	P	L
Template Known Secondary structure															T	T	S	S										T	T	T	T								S	T	T													T	T																				S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	L	T	F	M	N	K	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	V	L	V	A	N	K	T	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions