Job Description P0A7I4 Confidence 99.09% Date Thu Jan 5 11:05:43 GMT 2012 Rank 123 Aligned Residues 145 % Identity 18% Template c2x2fD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:dynamin-1; PDBTitle: dynamin 1 gtpase dimer, short axis form Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.								.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	S	P	Y	L	Q	E	V	A	K	R	R	T	.	.	.	.	.	.	.	F	A	I	I	S	H	P	D	A	G	K	T	T	I	T	E	K	V	L	L	F	G	Q	A	I	Q	T	A	G	T	V	K	G	R	G	S	N	Q	H	A	K	S	D	W	M	E	M	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.																																	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.
Template Sequence		D	L	I	P	L	V	N	R	L	Q	D	A	F	S	A	D	L	D	L	P	Q	I	A	V	V	G	G	Q	S	A	G	K	S	S	V	L	E	N	F	V	G	R	D	F	L	P	R	G	S	G	I	V	T	.	.	.	.	R	R	P	L	V	L	Q	L	V	N	A	T	T	E	Y	A	E	F	L	H	C	K	G
Template Known Secondary structure		G	G																									B	T	T	S	S							T	T	T		S	S		S				S	S	S			.	.	.	.		S										S	S						T	T	S	T	T
Template Predicted Secondary structure																																																							.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
																							63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.														.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	Q	R	G	I	S	I	T	T	S	V	M	Q	F	P	Y	H	D	C	L	.	V	N	L	L	D	T	P	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	F	S	E	D	T	Y	R	T	L	T	A	V	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	F	T	D	F	E	E	V	R	L	E	I	E	A	E	T	D	R	V	T	G	T	N	K	G	I	S	P	V	P	I	N	L	R	V	Y	S	P	H	V	L	N	L	T	L	V	D	L	P	G	X	T	K	V	P	V	G	D	Q	P	P	D	I	E	F	Q	I	R	D	X	L	X	Q	F	V	T	K	E	N
Template Known Secondary structure				B																				S	S	S					S									T	T			S									B		S	S			T	T			T	T														T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		108		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure			.																.
Query SS confidence			.																.
Query Sequence		C	.	C	L	M	V	I	D	A	A	K	G	V	E	D	R	T	.	R	K	L	M	E	V	T	R	L	R	D	T	P	I	L	T	F	M	N	K	L	D	R	D	I	R	D
Query Conservation			.																.
Alig confidence			.																.
Template Conservation
Template Sequence		C	L	I	L	A	V	S	P	A	N	S	D	L	A	N	S	D	A	L	K	V	A	K	E	V	D	P	Q	G	Q	R	T	I	G	V	I	T	K	L	D	L	X	D	E	G
Template Known Secondary structure										T	T	S		G	G	G												T	T		S	S								G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions