Job Description P0A7I4 Confidence 98.21% Date Thu Jan 5 11:05:43 GMT 2012 Rank 238 Aligned Residues 130 % Identity 19% Template c2j7pA_ PDB info PDB header:signal recognition Chain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy Resolution 1.97 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.														.
Predicted Secondary structure																																																			.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	F	A	I	I	S	H	P	D	A	G	K	T	T	I	T	E	K	V	L	L	F	G	Q	A	I	Q	T	A	G	T	V	K	G	R	G	S	N	Q	H	A	K	S	D	W	M	E	M	.	E	K	Q	R	G	I	S	I	T	T	S	V	M	Q	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	Y
Query Conservation																																																			.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	L	W	F	L	V	G	L	Q	G	S	G	K	T	T	T	A	A	K	L	A	L	Y	Y	K	G	K	G	R	R	P	L	L	V	A	A	D	T	Q	R	P	A	A	R	E	Q	L	R	L	L	G	E	K	V	G	V	P	V	L	E	V	M	D	G	E	S	P	E	S	I	R	R	R	V	E	E	K	A	R	L
Template Known Secondary structure									S	T	T	S	S														T	T	T											S	S	T	T													T								T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure														.	.	.	.																.	.
Query SS confidence														.	.	.	.																.	.
Query Sequence		H	D	C	L	V	N	L	L	D	T	P	G	.	.	.	.	H	E	D	F	S	E	D	T	Y	R	T	L	T	A	V	.	.	D	C	C	L	M	V	I	D	A	A	K	G	V	E	D	R	T	R	K	L	M	E	V	T	R	L	R	D	T	P	I	L	T	F	M	N	K	L	D
Query Conservation														.	.	.	.																.	.
Alig confidence														.	.	.	.																.	.													.																						.
Template Conservation																																															.																						.
Template Sequence		E	A	R	D	L	I	L	V	D	T	A	G	R	L	Q	I	D	E	P	L	M	G	E	L	A	R	L	K	E	V	L	G	P	D	E	V	L	L	V	L	D	A	M	T	G	.	Q	E	A	L	S	V	A	R	A	F	D	E	K	V	G	V	T	G	L	V	L	.	T	K	L	D
Template Known Secondary structure		T	T													T	T																		S								T	T			.	T	T												T								.			T	T
Template Predicted Secondary structure																																															.																						.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions