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Job DescriptionP0A7I4
Confidence98.44%DateThu Jan 5 11:05:43 GMT 2012
Rank202Aligned Residues154
% Identity19%Templatec2bovA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ras-related protein ral-a; PDBTitle: molecular recognition of an adp-ribosylating clostridium2 botulinum c3 exoenzyme by rala gtpase
Resolution2.66 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60.........70.........80.........90.....
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Query Sequence  FAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDF
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Template Sequence  VIMVGSGGVGKSALTLQFMYDEFVEDYEPTKA. . . . . . . . . . . . . . . . . . . . . DSYRKKVVLDGEEVQIDILDTAGQEDY
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   17..20.........30.........40........ .50.........60.........70.....
 
   96...100.........110.........120.........130. ........140.........150.........160.........170
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Query Sequence  SEDTYRTLTAVDCCLMVIDAAKGVEDRTRKLMEVTR. . . . . LRDTPILTFMNKLDRDIRDPMELLDEVENELKIGCAPIT
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Template Sequence  AAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLED. . . . . . . . . . . . . . . . . . . . . .
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   76...80.........90.........100.........110.........120.........130...
 
   171........180.........190.........200.........210.........220.........230.........240.........250
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Query Sequence  WPIGCGKLFKGVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAAVGEDLAQQLRDELELVKGASNEFDKELFLAGE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KRQVSVEEAKNRAEQWN. . . .
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   134.....140.........150
 
   251........260.........270......
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Query Sequence  ITPVFFGTALGNFGVDHMLDGLVEWA
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Template Sequence  . VNYVETSAKTRANVDKVFFDLMREI
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   151........160.........170.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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