Job Description P0A7I4 Confidence 100.00% Date Thu Jan 5 11:05:43 GMT 2012 Rank 34 Aligned Residues 272 % Identity 18% Template c1s0uA_ PDB info PDB header:translation Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit; PDBTitle: eif2gamma apo Resolution 2.40 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		T	F	A	I	I	S	H	P	D	A	G	K	T	T	I	T	E	K	V	L	L	F	G	Q	A	I	Q	T	A	G	T	V	K	G	R	G	S	N	Q	H	A	K	S	D	W	M	E	M	E	K	Q	R	G	I	S	I	T	T	S	V	M	Q	F	P	.	Y	H	D	C	L	V	N	L	L	D	T	P	G	H	E
Query Conservation																																																																		.
Alig confidence																																			.	.	.	.																												.
Template Conservation																																			.	.	.	.
Template Sequence		N	I	G	M	V	G	H	V	D	H	G	K	T	S	L	T	K	A	L	T	G	V	W	T	D	R	G	I	S	I	R	L	G	.	.	.	.	Y	A	D	C	E	I	R	K	C	P	Q	C	G	T	Y	T	T	K	P	R	C	P	N	C	L	A	E	T	E	F	L	R	R	V	S	F	V	D	S	P	G	H	E
Template Known Secondary structure							S		T	T	S	S										S													.	.	.	.										T	T	T					S	S	S	B		T	T	S			B													S	S
Template Predicted Secondary structure																																			.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																												.																	.															.
Query SS confidence																												.																	.															.
Query Sequence		D	F	S	E	D	T	Y	R	T	L	T	A	V	D	C	C	L	M	V	I	D	A	A	K	G	V	.	E	D	R	T	R	K	L	M	E	V	T	R	L	R	D	T	.	P	I	L	T	F	M	N	K	L	D	R	D	I	R	.	D	P	M	E	L	L	D	E	V	E	N	E	L	K	I	G	C	A	P	I	T
Query Conservation																												.																	.															.
Alig confidence																												.																	.															.																					.
Template Conservation																																																																																	.
Template Sequence		T	L	M	A	T	M	L	S	G	A	S	L	M	D	G	A	I	L	V	I	A	A	N	E	P	C	P	Q	P	Q	T	K	E	H	L	M	A	L	E	I	L	G	I	D	K	I	I	I	V	Q	N	K	I	D	L	V	D	E	K	Q	A	E	E	N	Y	E	Q	I	K	E	F	V	K	G	T	I	A	E	N	.
Template Known Secondary structure									T	T		S			S								T	T	S		S	S														T	T											T	T	S	S		T	T	T	T	T	T										T	T	S	T	T	T	T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		W	P	I	G	C	G	K	L	F	K	G	V	Y	H	L	Y	K	D	E	T	Y	L	Y	Q	S	G	K	G	H	T	I	Q	E	V	R	I	V	K	G	L	N	N	P	D	L	D	A	A	V	G	E	D	L	A	Q	Q	L	R	D	E	L	E	L	V	K	G	A	S	N	E	F	D	K	E	L	F	L	A	G	E
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	P	V	F	F	G	T	A	L	G	N	F	G	V	D	H	M	L	D	G	L	V	E	W	A	P	A	P	M	P	R	Q	T	D	T	R	T	V	E	A	S	E	D	K	F	T	G	F	V	F	K	I	Q	A	N	M	D	P	K	H	R	D	R	V	A	F	M	R	V	V	S	G	K	Y	E	K	G	M	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.																								.																									.	.	.
Template Conservation		.	.	.	.	.	.	.																								.																									.	.	.
Template Sequence		.	.	.	.	.	.	.	A	P	I	I	P	I	N	I	D	V	L	L	K	A	I	Q	D	F	I	P	T	P	K	.	R	D	P	D	A	T	P	R	M	Y	V	A	R	S	F	D	I	N	K	P	G	T	E	I	.	.	.	K	D	L	K	G	G	V	L	G	G	A	I	I	Q	G	V	F	K	V	G	D	E
Template Known Secondary structure		.	.	.	.	.	.	.																			S					.			T	T	S															S	S			G	.	.	.	G	G													S				T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																								.																									.	.	.
Template SS confidence
									201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		331	.	.	.	.	.	.	.													.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.								.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Query Sequence		L	R	Q	V	R	T	A	K	.	.	.	.	.	.	.	.	.	.	.	.	D	V	V	I	S	D	A	L	T	F	M	A	G	D	R	S	H	V	E	E	A	Y	P	G	D	I	L	G	L	H	.	.	.	.	.	.	.	N	H	G	T	I	Q	I	G	D	T	F	T	Q	G	E	M	M	K
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.																	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		I	E	I	R	P	G	I	K	V	T	E	G	N	K	T	F	W	K	P	L	T	T	K	I	V	S	L	A	A	G	.	.	.	.	N	T	I	L	R	K	A	H	P	G	G	L	I	G	V	G	T	T	L	D	P	Y	L	T	K	S	D	A	L	T	G	S	V	V	G	L	P	G	T	L	P
Template Known Secondary structure													T	T																	T	.	.	.	.	T				S				S	S	S							S	S		G	G	G	T	G	G	G	T	T	T	T					S	T	T		S
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions