Job Description P0A7I4 Confidence 99.64% Date Thu Jan 5 11:05:43 GMT 2012 Rank 72 Aligned Residues 170 % Identity 22% Template c1lnzA_ PDB info PDB header:cell cycle Chain: A: PDB Molecule:spo0b-associated gtp-binding protein; PDBTitle: structure of the obg gtp-binding protein Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		E	V	A	K	R	R	T	F	A	I	I	S	H	P	D	A	G	K	T	T	I	T	E	K	V	L	L	F	G	Q	A	I	Q	T	A	G	T	V	K	G	R	G	S	N	Q	H	A	K	S	D	W	M	E	M	E	K	Q	R	G	I	S	I	T	T	S	V	M	Q	F	P	Y	H	D	.	C	L	V	N	L	L
Query Conservation																																																																											.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	K	V	L	A	D	V	G	L	V	G	F	P	S	V	G	K	S	T	L	L	S	V	V	S	S	A	K	P	K	I	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	H	F	T	T	L	V	P	N	L	G	X	V	E	T	D	D	G	R	S	F	V	X	A
Template Known Secondary structure													S	S	T	T	S	S								S								S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S												S	S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.																							.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		88	.	90	.	.								.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.										.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure							.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.
Query Sequence		D	T	P	G	H	.	.	.	.	.	.	.	E	D	F	S	E	D	T	Y	R	T	L	T	A	V	D	C	C	L	M	V	I	D	A	A	K	G	V	E	D	R	T	R	K	L	M	E	V	T	R	L	R	.	.	.	.	.	.	.	.	.	D	T	P	I	L	T	F	M	N	K	L	D	R	D	I	R	D	P
Query Conservation							.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.																		.
Template Conservation																																																																																	.
Template Sequence		D	L	P	G	L	I	E	G	A	H	Q	G	V	G	L	G	H	Q	F	L	R	H	I	E	R	T	R	V	I	V	H	V	I	D	X	S	G	L	E	G	R	D	P	Y	D	D	Y	L	T	I	N	Q	E	L	S	E	Y	N	L	R	L	T	E	R	P	Q	I	I	V	A	N	K	X	D	X	P	E	A	A	.
Template Known Secondary structure										T	T		T	T	T	T																				S	S		S	S																		S		S	S	T	T	T	S		B		B					T	T	S	T	T			.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	L	L	D	E	V	E	N	E	L	K	I	G	C	A	P	I	T	W	P	I	G	C	G	K	L	F	K	G	V	Y	H	L	Y	K	D	E	T	Y	L	Y	Q	S	G	K	G	H	T	I	Q	E	V	R	I	V	K	G	L	N	N	P	D	L	D	A	A	V	G	E	D	L	A	Q	Q	L	R	D	E	L
Query Conservation
Alig confidence		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	E	N	L	E	A	F	K	E	K	L	T	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.												S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			291	.	.	.	.	.	.	.	.	300	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	V	K	G	A	S	N	E	F	D	K	E	L	F	L	A	G	E	I	T	P	V	F	F	G	T	A	L	G	N	F	G	V	D	H	M	L	D	G	L	V	E	W	A	P	A	P	M	P	R	Q	T	D	T	R	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	V	F	P	I	S	A	V	T	R	E	G	L	R	E	L	L	F	E	V	A	N	Q	L	E	N	T	P	E	F	P	L	Y	D	E	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B				S	S			S	S	T	T												T	S						S	S		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																						304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions