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Job DescriptionP0A7I4
Confidence100.00%DateThu Jan 5 11:05:43 GMT 2012
Rank31Aligned Residues277
% Identity22%Templatec1kk3A_
PDB info PDB header:translationChain: A: PDB Molecule:eif2gamma; PDBTitle: structure of the wild-type large gamma subunit of2 initiation factor eif2 from pyrococcus abyssi complexed3 with gdp-mg2+
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TFAIISHPDAGKTTITEKVLLFGQAIQ. . TAGTVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGH
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Template Sequence  NIGMVGHVDHGKTTLTKALTGVWTDSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGH
Template Known Secondary structure  SSTTSST





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Query Sequence  EDFSEDTYRTLTAVDCCLMVIDAAKGV. EDRTRKLMEVTRLRDTP. ILTFMNKLDRDIR. DPMELLDEVENELKIGCAPI
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Template Sequence  EALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTV. . .
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GGG
STTS
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T



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Query Sequence  TWPIGCGKLFKGVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAAVGEDLAQQLRDELELVKGASNEFDKELFLAG
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Template Known Secondary structure  ...............................................................................T
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Query Sequence  EITPVFFGTALGNFGVDHMLDGLVEWAPAPMPRQTDTRTVEASEDKFTGFVFKIQAN. . MDPKHRDRVAFMRVVSGKYEK
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Template Sequence  ENAPIIPISALHGANIDVLVKAIEDFIPTPKR. . . . . . . . . DPNKPPKMLVLRSFDVNKPGEKLVGGVLGGSIVQGKLKV
Template Known Secondary structure  TT


BTTTTBTS




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   172.......180.........190.........200... ......210.........220.........230.........240..
 
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Query Sequence  GMKLRQVR. . . . . . . . . . . . TAKDVVISDALTFMAGDRSHVEEAYPGDILGL. . . . . HNHG. . TIQIGDTFTQGEMMK
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Template Sequence  GDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAG. . . . GQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLP
Template Known Secondary structure  T
TTT....T
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GGGTGGGTTTT

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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