Return to main results Retrieve Phyre Job Id

Job DescriptionP39366
Confidence99.82%DateThu Jan 5 11:59:57 GMT 2012
Rank57Aligned Residues244
% Identity13%Templated1xmba1
SCOP infoPhosphorylase/hydrolase-like Zn-dependent exopeptidases Bacterial dinuclear zinc exopeptidases
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  VQETLFSLLQHNAISGHENAVADVMLCEFRRQAKEVWRDRLGNVVARYGSDKPDALRLMIFAHMDEVGFMVRKIEPSGFL
Query Conservation    
 
  

  

 

 
   
  
   
   
  
  
  




   
     
 


 

 



        

  
Alig confidence 





















































.
























Template Conservation 
  

  

  

 
  
  

  
   
   
  
        
 
       .  
 
 
  



  
       
 
Template Sequence  MVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEP. PFVALRADMDALPIQEGVEWEHKSK
Template Known Secondary structure  S


TT

T

TTTSSSS.



BS





STT

S
Template Predicted Secondary structure 


















.

















Template SS confidence 















































































   51........60.........70.........80.........90.........100.... .....110.........120.........
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  RFERVGGPAQVTMAGSIVTLTGDKGPVMGCIGIKSYHFAKGDERTQSPSVDKLWIDIGAKDKDDAIRMGIQVGTPVTLYN
Query Conservation       
  
     
  
          
             
                          
  
       
Alig confidence 














































..














...........




Template Conservation    
  
 



   
  
 

  
      
 
 
   
 
 

   ..

  

  
    

...........     
Template Sequence  IAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLS. . GAKKMREEGALKNVE. . . . . . . . . . . AIFGI
Template Known Secondary structure  STT
B

SSTGGG
SS

TTTT
..TTTTTT...........
Template Predicted Secondary structure 



















..







...........
Template SS confidence 















































































   130.........140.........150.........160.........170...... ...180.........190. .....
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  PPQLLANDLVCSKALDDRLGCTALLGVADAISTMELDIAVYLVASVQEEFNIRGIVPVLRRVKPDLAIGIDITPSCDTPD
Query Conservation       
   
          
 
       
             
        
                          
Alig confidence 














.................................................................
Template Conservation 
       
      .................................................................
Template Sequence  HLSARIPFGKAASRA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT

S.................................................................
Template Predicted Secondary structure 









.................................................................
Template SS confidence 















































































   197..200.........210.
 
   245....250.........260.........270.........280.........290......... 300.........310.........320..
Predicted Secondary structure 



















..










Query SS confidence 






















































. .






















Query Sequence  LHDYSEVRINQGVGITCLNYHGRGTLAGLITPPRLIRMLEQTALEHNIPVQREVA. . PGVITETGYIQVEQDGIPCASLS
Query Conservation                                    
           
        ..  




        




  
Alig confidence  ........................






























..












...






Template Conservation  ........................      
                
   
    
   




 
   ...


    
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . GSFLTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAET. . . IPGHFSL
Template Known Secondary structure  ........................




GGG







TTT...S
Template Predicted Secondary structure  ........................



















...

Template SS confidence 















































































   212.......220.........230.........240.........250....... ..260....
 
   323.... ..330.........340.........350....
Predicted Secondary structure 




.......





Query SS confidence 




. . . . . . .


























Query Sequence  IPCRY. . . . . . . THSPAEVASLRDLTDCIRLLTALAGMS
Query Conservation       ....... 
   
 
 
 

      
 

    
Alig confidence 




.......


























Template Conservation 

 
         


 
  

  
  

      
   
Template Sequence  LGMQDETNGYASSHSPLYRINEDVLPYGAAIHASMAVQY
Template Known Secondary structure 
TT

S

TT
TT



GGG
Template Predicted Secondary structure 



















Template SS confidence 






































   384.....390.........400.........410.........420..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions