Return to main results Retrieve Phyre Job Id

Job DescriptionP39366
Confidence100.00%DateThu Jan 5 11:59:57 GMT 2012
Rank38Aligned Residues250
% Identity32%Templated1xfoa2
SCOP infoPhosphorylase/hydrolase-like Zn-dependent exopeptidases Bacterial dinuclear zinc exopeptidases
Resolution1.96

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  FSVQETLFSLLQHNAISGHE. NAVADVMLCEFRRQAKEVWRDRLGNVVARYGSDKPDALRLMIFAHMDEVGFMVRKIEPS
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Template Sequence  VDY. ELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVDKLGNVIAHKKGEG. . . PKVMIAAHMDQIWDGRLERLGK
Template Known Secondary structure 

.S

BTT
GGGTGGGSS
TT



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B





TT
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   7.. 10.........20.........30.........40.........50.........60 .........70.........80..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  GFLRFERVGGPAQVTMAGSIVTLTGDKGPVMGCIGIKSYHFAKGDERTQSPSVDKLWIDIGAKDKDDAIRMGIQVGTPVT
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Template Sequence  HRF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T.............................................................................
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Query Sequence  LYNPPQLLANDLVCSKALDDRLGCTALLGVADAISTMELDIAVYLVASVQEEFNIRGIVPVLRRVKPDLAIGIDITPSCD
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Template Sequence  . . . . . . . . . . . . . VSIAFDDRIAVYTILEVAKQLKD. . AKADVYFVATVQEEVGLRGARTSAFGIEPDYGFAIDVTIAAD
Template Known Secondary structure  .............TT

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SSS
STTTS

SB

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   177..180.........190......... 200.........210.........220.........230.........240.
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  TPDLHDYSEVRINQGVGITCLNYHGRGTLAGLITPPRLIRMLEQTALEHNIPVQREVAPGVITETGYIQVEQDGIPCASL
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Template Sequence  IPGTPEHKQVTHLGKGTAIKIMDRSVIC. . . . . . HPTIVRWLEELAKKHEIPYQLEILLGGGTDAGAIHLTKAGVPTGAL
Template Known Secondary structure  STT

GGG
BS
TTS

SS
B
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TTTSTT


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   242.......250.........260......... 270.........280.........290.........300.........310.....
 
   322.......330.........340.........350....
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Query Sequence  SIPCRYTHSPAEVASLRDLTDCIRLLTALAGMS
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Template Sequence  SVPARYIHSNTEVVDERDVDATVELMTKALENI
Template Known Secondary structure  BS
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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