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Job DescriptionP39366
Confidence99.91%DateThu Jan 5 11:59:57 GMT 2012
Rank54Aligned Residues227
% Identity18%Templated1r3na1
SCOP infoPhosphorylase/hydrolase-like Zn-dependent exopeptidases Bacterial dinuclear zinc exopeptidases
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MSFS. . . VQETLFSLLQ. . . . . . . . . . . . . . . . . . HNAISGHENAVADVMLCEFRRQAKEVWRDRLGNVVARYGSDKPDA
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Template Sequence  LSIASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVDKIGNMFAVYPGKNGG.
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Query Sequence  LRLMIFAHMDEVGFMVRKIEPSGFLRFERVGGPAQVTMAGSIVTLTGDKGPVMGCIGIKSYHFAKGDERTQSPSVD. . . .
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Template Sequence  KPTATGSHLDTQPEA. . . . . . . . . . . . . . . GKYDGILGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNEEGARFARSCTGS
Template Known Secondary structure  S





SSB...............
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   107..110.........120. ........130.........140.........150.........160.........170.
 
   136...140.........150.........160...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KLWIDIGAKDKDDAIRMGIQVGTPVTLY
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Template Sequence  SVWSHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASYKENEIDAHFELHIEQGPILEDENKAIGIVTGVQAVNF
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T
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SB

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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  NPPQLLANDLVCSKALDDRLGCTALLGVADAISTMELDIAVYLVASVQEEFNIRGIVPVLRRVKPDLAIGIDITPSCDTP
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Template Sequence  HEVCIECVSRSAFAQFKKDQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   368.370.........380.......
 
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Query Sequence  DLHDYSEVRINQGVGITCLNYHGRGTLAGLITPPRLIRMLEQTALEHNIPVQREVAPGVITETGYIQVEQDGIPCASLSI
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VRQIWSGAGHDSCQT. . APHVPTSMIFIP
Template Known Secondary structure  ...................................................SS

T..TTTS

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   388.390.........400.. .......410....
 
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Query Sequence  P. CRYTHSPAEVASLRDLTDCIRLLTALAGMSAA
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Template Sequence  SKDGLSHNYYEYSSPEEIENGFKVLLQAIINYDN
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GGG

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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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