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Job DescriptionP39366
Confidence100.00%DateThu Jan 5 11:59:57 GMT 2012
Rank15Aligned Residues345
% Identity12%Templatec3tx8A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase; PDBTitle: crystal structure of a succinyl-diaminopimelate desuccinylase (arge)2 from corynebacterium glutamicum atcc 13032 at 2.97 a resolution
Resolution2.97 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MSFSVQETLFSLLQHNAISGHENAVADVMLCEFRRQAKEVWR. . DRLGNVVARYGSDKPDALRLMIFAHMDEVGFMVRKI
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Template Sequence  LLGDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNR. . GLASRVXLAGHIDTVPIADNLP
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Query Sequence  EPSGFLRFERVGGPAQVTMAGSIVTLTGDKGPVMGCIGIKSYHFAKGDERTQSPSVDKL. . . . . . . WIDIGAKDKDDAIR
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Template Sequence  SRVEDGIXYGCGTVDXKSGLAVYLHTFATLATSTELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAADLALLGEPTG
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SSSSSTTTTTS
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Query Sequence  MGIQVGTPVTLYNPPQLLANDLVCSKALDDRLGCTALLGVADAISTME. . . . LDIAVYLVASVQEEFNIRGIVPVLRRVK
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Template Sequence  GWIEAGCQGNLRIKVTAHGVRAHSARSWLGDNAXHKLSPIISKVAAYKAAEVNIDGLTYREGLNIVFCESGVANNVIPDL
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SB

B

BTTSGGGSB
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Query Sequence  PDLAIGIDITPSCDTPDLHDYSEVRINQGVGITCLNYHGRGTLAGLITPPRLIRMLEQTALEHNIPVQREVAPGVITETG
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Template Sequence  AWXNLNFRFAPNRDLNEAIEHVVETLELDGQDGIEWAVEDGAGGA. . . LPGLGQQVTSGLIDAVGREKI. RAKFGWTDVS
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Query Sequence  YIQVEQDGIPCASLSIP. CRYTHSPAEVASLRDLTDCIRLLTALAGM
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Template Sequence  RF. . SAXGIPALNFGAGDPSFAHKRDEQCPVEQITDVAAILKQYLSE
Template Known Secondary structure  ..TTT


SS
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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