Job Description P39366 Confidence 100.00% Date Thu Jan 5 11:59:57 GMT 2012 Rank 29 Aligned Residues 336 % Identity 13% Template c3ramC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:hmra protein; PDBTitle: crystal structure of hmra Resolution 2.70 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		S	V	Q	E	T	L	F	S	L	L	Q	H	N	A	I	S	G	H	E	N	A	V	A	D	V	M	L	C	E	F	R	R	Q	A	K	E	V	W	R	D	R	L	G	.	.	.	N	V	V	A	R	Y	G	S	D	K	P	D	A	L	R	L	M	I	F	A	H	M	D	E	V	G	F	M	V	R	K	I	E	P
Query Conservation																																													.	.	.
Alig confidence																																													.	.	.													.														.	.	.	.	.	.	.	.
Template Conservation																																																												.														.	.	.	.	.	.	.	.
Template Sequence		S	Y	I	E	I	S	H	R	I	H	E	R	P	E	L	G	N	E	E	I	F	A	S	R	T	L	I	D	R	L	K	E	H	D	F	E	I	E	T	E	I	A	G	H	A	T	G	F	I	A	T	Y	D	S	G	L	D	G	.	P	A	I	G	F	L	A	E	Y	D	A	L	P	.	.	.	.	.	.	.	.
Template Known Secondary structure													S			B	T	T															T	T	T								T	T												S	S	S	S	.											B		T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.														.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.								.	150	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.
Query Sequence		S	G	F	L	R	F	E	R	V	G	G	P	A	Q	V	T	M	A	G	S	I	V	T	L	T	G	D	K	G	P	V	M	G	C	I	G	I	K	S	Y	H	F	A	K	G	D	E	R	T	Q	S	P	S	V	D	K	L	W	I	D	I	G	A	K	D	K	D	D	.	.	.	.	.	.	.	A	I	R	M	G
Query Conservation																																																																						.	.	.	.	.	.	.
Alig confidence		.	.	.																														.	.																																			.	.	.	.	.	.	.
Template Conservation		.	.	.																														.	.
Template Sequence		.	.	.	G	L	G	H	A	C	G	H	N	I	I	G	T	A	S	V	L	G	A	I	G	L	K	Q	V	I	D	Q	I	.	.	G	G	K	V	V	V	L	G	C	P	A	E	E	G	G	E	N	G	S	A	K	A	S	Y	V	K	A	G	V	I	D	Q	I	D	I	A	L	X	I	H	P	G	N	E	T	Y
Template Known Secondary structure		.	.	.	T	T	S	S	S	S																								.	.		S										T	T			T	T											T	G	G	G	G		S									S	S	B	B
Template Predicted Secondary structure		.	.	.																														.	.
Template SS confidence
					88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																									.																										.	.
Query SS confidence																									.																										.	.
Query Sequence		I	Q	V	G	T	P	V	T	L	Y	N	P	P	Q	L	L	A	N	D	L	V	C	S	.	K	A	L	D	D	R	L	G	C	T	A	L	L	G	V	A	D	A	I	S	T	M	E	L	D	.	.	I	A	V	Y	L	V	A	S	V	Q	E	E	F	N	I	R	G	I	V	P	V	L	R	R	V	K	P	D	L
Query Conservation																									.																										.	.
Alig confidence																									.																										.	.
Template Conservation
Template Sequence		K	T	I	D	T	L	A	V	D	V	L	D	V	K	F	Y	G	K	S	A	H	A	S	E	N	A	D	E	A	L	N	A	L	D	A	X	I	S	Y	F	N	G	V	A	Q	L	R	Q	H	I	K	K	D	Q	R	V	H	G	V	I	L	D	G	G	K	A	A	N	I	I	P	D	Y	T	H	A	R	F	Y	T
Template Known Secondary structure						B													B			B	T	T	T		G	G	G		B																	T	T	S	S		T	T												S		T	T	B			S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	G	I	D	I	T	P	S	C	D	T	P	D	L	H	D	Y	S	E	V	R	I	N	Q	G	V	G	I	T	C	L	N	Y	H	G	R	G	T	L	A	G	L	I	T	P	P	R	L	I	R	M	L	E	Q	T	A	L	E	H	N	I	P	V	Q	R	E	V	A	P	G	V	I	T	E	T	G	Y	I	Q
Query Conservation
Alig confidence																							.																																																										.
Template Conservation																							.																																																										.
Template Sequence		R	A	X	T	R	K	E	L	D	I	L	T	E	K	V	N	Q	I	A	R	G	.	A	A	I	Q	T	G	C	D	Y	E	F	G	P	I	Q	N	G	V	N	E	F	I	K	T	P	K	L	D	D	L	F	A	K	Y	A	E	E	V	G	E	A	V	I	D	D	D	F	G	Y	G	S	T	D	T	G	N	V	.
Template Known Secondary structure				S	S																		.						T								S	S			B																				T	T			B			S					B			T					.
Template Predicted Secondary structure																							.																																																										.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		311	.	.	.	.	.	.	.	.	320	.					.	.	.	.	.	.	.	.	330	.	.							.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.												.	.	.	.	.	.
Query SS confidence													.	.	.	.												.	.	.	.	.	.
Query Sequence		V	E	Q	D	G	I	P	C	A	S	L	.	.	.	.	S	I	P	C	R	Y	T	H	S	P	A	.	.	.	.	.	.	E	V	A	S	L	R	D	L	T	D	C	I	R	L	L	T	A	L	A	G	M	S	A	A	H
Query Conservation													.	.	.	.												.	.	.	.	.	.
Alig confidence		.	.										.	.	.	.												.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	S	H	V	V	P	T	I	H	P	H	I	K	I	G	S	R	N	L	V	G	H	T	H	R	F	R	E	A	A	A	S	V	H	G	D	E	A	L	I	K	G	A	K	I	X	A	L	X	G	L	E	L	I	T	N
Template Known Secondary structure		.	.	T	T	T	S		B								S		T	T			T	T	S								T	S
Template Predicted Secondary structure		.	.
Template SS confidence
				321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions