Job Description P39366 Confidence 99.94% Date Thu Jan 5 11:59:57 GMT 2012 Rank 46 Aligned Residues 344 % Identity 16% Template c3l6sA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:aspartyl aminopeptidase; PDBTitle: crystal structure of human aspartyl aminopeptidase (dnpep),2 in complex with aspartic acid hydroxamate Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		V	Q	E	T	L	F	S	L	L	Q	H	N	A	I	S	G	H	E	N	A	V	A	D	V	M	L	C	E	F	R	R	Q	A	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	W	R	D	R	L	G	N	V	V	A	R	Y	G	S	D	K	P	D	.	.	A	L	R	L	M	I	F	A
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		V	Q	T	A	A	K	E	L	L	K	F	V	N	R	S	P	S	P	F	H	A	V	A	E	C	R	N	R	L	L	Q	A	G	F	S	E	L	K	E	T	E	K	W	N	I	K	P	E	S	K	Y	F	M	T	R	N	S	S	T	I	I	A	F	A	V	G	G	Q	Y	V	P	G	N	G	F	S	L	I	G	A
Template Known Secondary structure															T		S	S															T	T						T	T	S						T	T								T	T	T									T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		67	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure													.	.	.						.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.						.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	M	D	E	V	G	F	M	V	R	K	.	.	.	I	E	P	S	G	.	.	F	L	R	F	E	R	V	G	G	P	A	Q	V	T	M	A	G	S	I	V	T	L	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	G	P	V	M	G	C	I	G	I	K	S	Y	H	F	A	K
Query Conservation													.	.	.						.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.						.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	T	D	S	P	C	L	R	V	K	R	R	S	R	R	S	Q	V	G	F	Q	Q	V	G	V	E	T	Y	G	G	G	I	W	S	T	W	F	D	R	D	L	T	L	A	G	R	V	I	V	K	C	P	T	S	G	R	L	E	Q	Q	L	V	H	V	E	R	P	I	L	R	I	P	H	L	A	I	H	L	Q	R
Template Known Secondary structure																			T	T										S	S			G	G	G	G	T	T														T	T	T												S			B	B						G	G	G	S	T
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.																		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.									.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Query Sequence		G	D	E	R	T	Q	S	P	S	V	D	K	L	W	I	D	I	G	A	K	D	K	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	R	M	G	I	Q	V	G	T	P	V	T	L	Y	.	.	.	.	.	.	.	.	N	P	P	Q	L	L	A	N	D	L	V	C	S	K	A	L
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	N	E	N	F	G	P	N	T	E	M	H	L	V	P	I	L	A	T	A	I	Q	E	E	L	E	K	G	T	E	R	H	H	S	V	L	M	S	L	L	C	A	H	L	G	L	S	P	K	D	I	V	E	M	E	L	C	L	A	D	T	Q	P	A	V	L	G	G	A	Y	D	E	F	I	F	A	P	R	L
Template Known Secondary structure		T	T	T	T						T	T	T	T															T					S													T			G	G	G												S						T	T	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230																							.	.
Predicted Secondary structure																				.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	R	L	G	C	T	A	L	L	G	V	A	D	A	I	S	T	.	.	.	.	.	M	E	L	D	I	A	V	Y	L	V	A	S	V	Q	E	E	F	N	I	R	G	I	V	P	V	L	R	R	V	K	P	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I
Query Conservation																				.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	N	L	H	S	C	F	C	A	L	Q	A	L	I	D	S	C	A	G	P	G	S	L	A	T	E	P	H	V	R	M	V	T	L	Y	D	N	E	E	V	G	S	E	S	A	Q	G	A	Q	S	L	L	T	E	L	V	L	R	R	I	S	A	S	C	Q	H	P	T	A	F	E	E	A	I	P	K	S	F	M	I
Template Known Secondary structure																		T		S	T	T	T	T	T	T			S								S		G	G	G	T			S	T	T	S	T	T	S	T													S	S		T	T						G	G	G
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		233	.	.	.	.	.	.	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.				300	.	.	.	.	.	.
Predicted Secondary structure											.	.	.																																																											.	.	.
Query SS confidence											.	.	.																																																											.	.	.
Query Sequence		G	I	D	I	T	P	S	C	D	.	.	.	T	P	D	L	H	D	Y	S	E	V	R	I	N	Q	G	V	G	I	T	C	L	N	Y	H	G	R	G	T	L	A	G	L	I	T	P	P	R	L	I	R	M	L	E	Q	T	A	L	E	H	N	I	P	V	Q	R	E	V	A	.	.	.	P	G	V	I	T	E	T
Query Conservation											.	.	.																																																											.	.	.
Alig confidence											.	.	.																				.	.	.	.	.	.																																		.	.	.
Template Conservation																																	.	.	.	.	.	.
Template Sequence		S	A	D	M	A	H	A	V	H	P	N	Y	L	D	K	H	E	E	N	H	R	P	L	F	H	K	G	P	V	I	K	.	.	.	.	.	.	V	N	S	K	Q	R	Y	A	S	N	A	V	S	E	A	L	I	R	E	V	A	N	K	V	K	V	P	L	Q	D	L	M	V	R	N	D	T	P	C	G	T	T	I
Template Known Secondary structure											T	T	S	G	G	G	S		T	T					T	T	S						.	.	.	.	.	.			T	T	T	T	S																		T										T	T	S
Template Predicted Secondary structure																																	.	.	.	.	.	.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.							.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	I	Q	V	E	Q	D	G	I	P	C	A	S	L	S	I	P	C	R	Y	T	H	S	P	A	E	V	A	S	L	R	D	L	T	D	C	I	R	L	L	T	A	L	A	G	M	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	I	L	A	S	R	L	G	L	R	V	L	D	L	G	S	P	Q	L	A	M	H	S	I	R	E	M	A	C	T	T	G	V	L	Q	T	L	T	L	F	K	G	F	F	E	L	F
Template Known Secondary structure										T												S	T	T	S	S	S					S
Template Predicted Secondary structure
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.