Job Description P39366 Confidence 100.00% Date Thu Jan 5 11:59:57 GMT 2012 Rank 16 Aligned Residues 348 % Identity 11% Template c3ifeA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptidase t; PDBTitle: 1.55 angstrom resolution crystal structure of peptidase t (pept-1)2 from bacillus anthracis str. 'ames ancestor'. Resolution 1.55 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.											.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																	.																	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.																	.																	.
Query Sequence		S	V	Q	E	T	L	F	S	L	L	Q	H	N	A	I	S	G	H	E	N	.	.	.	.	.	.	.	.	.	.	A	V	A	D	V	M	L	C	E	F	R	R	Q	A	K	E	.	V	W	R	D	R	L	G	N	V	V	A	R	Y	G	S	D	.	K	P	D	A	L	R	L	M	I	F	A	H	M	D	E	V
Query Conservation																						.	.	.	.	.	.	.	.	.	.																	.																	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.																	.																	.
Template Conservation
Template Sequence		E	L	I	E	R	F	T	R	Y	V	K	I	D	T	Q	S	N	E	D	S	H	T	V	P	T	T	P	G	Q	I	E	F	G	K	L	L	V	E	E	L	K	E	V	G	L	T	E	V	T	M	D	D	N	G	Y	V	M	A	T	L	P	A	N	T	D	K	D	V	P	V	I	G	F	L	A	H	L	D	T	A
Template Known Secondary structure												T	S			B			T	T			S	S	S	S	S																		T								T	T	S									B	S	S	S													B
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		72	.	.	.	.	.	.																																		.	80	.	.	.	.	.	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Query Sequence		G	F	M	V	R	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	S	G	F	L	R	F	E	R	V	G	G	P	.	.	.	.	A	Q	V	T	M	A	G	S	I	V	T	L	T	G	D	K	G	P	V	M	G	C
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation
Template Sequence		T	D	F	T	G	K	N	V	K	P	Q	I	H	E	N	F	D	G	N	A	I	T	L	N	E	E	L	N	I	V	L	T	P	E	Q	F	P	E	L	P	S	Y	K	G	H	T	I	I	T	T	D	G	T	T	L	L	G	A	D	D	K	A	G	L	T	E	I	M	V	A	M	N	Y	L	I	H	N	P	Q	I
Template Known Secondary structure		T	T	S			S	S							T	T			S	S						T	T	T	T					T	T	T		T	T	G	G	G	G	T	T	S							S	S	S																						T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																					.	.	.																																											.
Query SS confidence																					.	.	.																																											.
Query Sequence		I	G	I	K	S	Y	H	F	A	K	G	D	E	R	T	Q	S	P	S	.	.	.	V	D	K	L	W	I	D	I	G	A	K	D	K	D	D	A	I	R	M	G	I	Q	V	G	T	P	V	T	L	Y	N	P	P	Q	L	L	A	N	D	L	V	C	.	S	K	A	L	D	D	R	L	G	C	T	A	L	L	G
Query Conservation																					.	.	.																																											.
Alig confidence																					.	.	.																																											.
Template Conservation
Template Sequence		K	H	G	K	I	R	V	A	F	T	P	D	E	E	I	G	R	G	P	A	H	F	D	V	E	A	F	G	A	S	F	A	Y	M	M	D	G	G	P	L	G	G	L	E	Y	E	S	F	N	A	A	G	A	K	L	T	F	N	G	T	N	T	H	P	G	T	A	K	N	K	M	R	N	A	T	K	L	A	M	E
Template Known Secondary structure			B									S		G	G	G	T		T	G	G	G									S									S	T	T						B													B				G	G	G		T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.				.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		V	A	D	A	I	S	T	M	E	L	D	I	A	V	Y	L	V	A	S	V	Q	E	E	F	N	I	R	G	I	V	P	V	L	R	R	V	K	P	D	L	A	I	G	I	D	I	T	P	S	C	D	T	P	D	L	H	D	Y	S	E	V	R	I	N	Q	G	V	.	.	.	G	I	T	C	L	N	Y	H	G	R
Query Conservation																																																																					.	.	.
Alig confidence										.																																																											.	.	.
Template Conservation										.
Template Sequence		F	N	G	H	L	P	V	E	.	E	A	P	E	Y	T	E	G	Y	E	G	F	Y	H	L	L	S	L	N	G	D	V	E	Q	S	K	A	Y	Y	I	I	R	D	F	D	R	K	N	F	E	A	R	K	N	T	I	E	N	I	V	K	Q	M	Q	E	K	Y	G	Q	D	A	V	V	L	E	M	N	D	Q	Y	Y
Template Known Secondary structure					T	S		T	T	.		S	G	G	G			T	T													S	S											S	S																								G	G	G
Template Predicted Secondary structure										.
Template SS confidence
		244	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	L	A	G	L	I	T	P	P	R	L	I	R	M	L	E	Q	T	A	L	E	H	N	I	P	V	Q	R	E	V	A	P	G	V	I	T	E	T	G	Y	I	Q	V	E	Q	D	G	I	P	C	A	S	L	S	I	P	C	R	Y	T	H	S	P	A	E	V	A	S	L	R	D	L	T	D	C	I	R	L	L
Query Conservation
Alig confidence																															.													.	.
Template Conservation																															.													.	.
Template Sequence		N	M	L	E	K	I	E	P	V	R	E	I	V	D	I	A	Y	E	A	M	K	S	L	N	I	E	P	N	I	.	H	P	I	R	G	G	T	D	G	S	Q	L	.	.	S	Y	M	G	L	P	T	P	N	I	F	T	G	G	E	N	Y	H	G	K	F	E	Y	V	S	V	D	V	M	E	K	A	V	Q	V	I
Template Known Secondary structure			T					G	G	G	T													T	T						.			B	S	S								.	.			T	T									S			S	T	T	S	T	T
Template Predicted Secondary structure																															.													.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.			.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		348	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	L	A	G	M	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	I	A	R	R	F	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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