Job Description P39366 Confidence 100.00% Date Thu Jan 5 11:59:57 GMT 2012 Rank 7 Aligned Residues 353 % Identity 13% Template c3gb0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptidase t; PDBTitle: crystal structure of aminopeptidase pept (np_980509.1) from bacillus2 cereus atcc 10987 at 2.04 a resolution Resolution 2.04 Å

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		1	.	.	.		.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.									.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure						.																																								.	.	.	.	.	.	.	.
Query SS confidence						.																																								.	.	.	.	.	.	.	.
Query Sequence		M	S	F	S	.	V	Q	E	T	L	F	S	L	L	Q	H	N	A	I	S	G	H	E	N	A	V	A	D	V	M	L	C	E	F	R	R	Q	A	K	E	V	W	R	D	.	.	.	.	.	.	.	.	R	L	G	N	V	V	A	R	Y	G	S	D	K	P	D	A	L	R	L	M	I	F	A	H	M	D	E	V
Query Conservation						.																																								.	.	.	.	.	.	.	.
Alig confidence						.																																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	N	Q	E	R	L	V	N	E	F	X	E	L	V	Q	V	D	S	E	T	K	F	E	A	E	I	C	K	V	L	T	K	K	F	T	D	L	G	V	E	V	F	E	D	D	T	X	A	V	T	G	H	G	A	G	N	L	I	C	T	L	P	A	T	K	D	G	V	D	T	I	Y	F	T	S	H	X	D	T	V
Template Known Secondary structure		S														T	S			B	T	T																T	T							S								S	S										S	S	T	T												B
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																						.	.	.	.																																									.	.	.	.
Query SS confidence																						.	.	.	.																																									.	.	.	.
Query Sequence		G	F	M	V	R	K	I	E	P	S	G	F	L	R	F	E	R	V	G	G	.	.	.	.	P	A	Q	V	T	M	A	G	S	I	V	T	L	T	G	D	K	G	P	V	M	G	C	I	G	I	K	S	Y	H	F	A	K	G	D	E	R	T	Q	S	.	.	.	.	P	S	V	D	K	L	W	I	D	I	G	A
Query Conservation																						.	.	.	.																																									.	.	.	.
Alig confidence																						.	.	.	.																																									.	.	.	.
Template Conservation
Template Sequence		V	P	G	N	G	I	K	P	S	I	K	D	G	Y	I	V	S	D	G	T	T	I	L	G	A	D	D	K	A	G	L	A	S	X	F	E	A	I	R	V	L	K	E	K	N	I	P	H	G	T	I	E	F	I	I	T	V	G	E	E	S	G	L	V	G	A	K	A	L	D	R	E	R	I	T	A	K	Y	G	Y
Template Known Secondary structure		S	S		S	S							T	T						S	S	S																							T	T												S		G	G	G	T	S						S		G	G	G				S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		K	D	K	D	D	A	I	R	M	G	I	Q	V	G	T	P	V	T	L	Y	N	P	P	Q	L	L	A	N	D	L	V	C	S	.	K	A	L	D	D	R	L	G	C	T	A	L	L	G	V	A	D	A	I	S	T	M	E	L	D	I	A	V	Y	L	V	A	S	V	Q	E	E	F	N	I	R	G	I	V	P	V
Query Conservation																																			.
Alig confidence																																			.
Template Conservation
Template Sequence		A	L	D	S	D	G	K	V	G	E	I	V	V	A	A	P	T	Q	A	K	V	N	A	I	I	R	G	K	T	A	H	A	G	V	A	P	E	K	G	V	S	A	I	T	I	A	A	K	A	I	A	K	X	P	L	G	R	I	D	S	E	T	T	A	N	I	G	R	F	E	G	G	T	Q	T	N	I	V	C	D
Template Known Secondary structure							S		T	T																			B			B	T	T	T		G	G	G	S	B											T	T	S							T	T												S		T	T	B
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	R	V	K	P	D	L	A	I	G	I	D	I	T	P	S	C	D	T	P	D	L	H	D	Y	S	E	V	R	I	N	Q	G	V	G	I	T	C	L	N	Y	H	G	R	G	T	L	A	G	L	I	T	P	P	R	L	I	R	M	L	E	Q	T	A	L	E	H	N	I	P	V	Q	R	E	V	A	P	G	V
Query Conservation
Alig confidence																																																																												.
Template Conservation																																																																												.
Template Sequence		H	V	Q	I	F	A	E	A	R	S	L	I	N	E	K	X	E	A	Q	V	A	K	X	K	E	A	F	E	T	T	A	K	E	X	G	G	H	A	D	V	E	V	N	V	X	Y	P	G	F	K	F	A	D	G	D	H	V	V	E	V	A	K	R	A	A	E	K	I	G	R	T	P	S	L	.	H	Q	S	G	G
Template Known Secondary structure												S	S																						T	T																		T	T														T	T						.				S	S
Template Predicted Secondary structure																																																																												.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	E	T	G	Y	I	Q	V	E	Q	D	G	I	P	C	A	S	L	S	I	P	C	R	Y	T	H	S	P	A	E	V	A	S	L	R	D	L	T	D	C	I	R	L	L	T	A	L	A	G	M	S	A	A
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		G	S	D	A	N	V	I	.	.	A	G	H	G	I	P	T	V	N	L	A	V	G	Y	E	E	I	H	T	T	N	E	K	I	P	V	E	E	L	A	K	T	A	E	L	V	V	A	I	I	E	E	V	A	K
Template Known Secondary structure									.	.			T	T											B	S	T	T	S	T	T
Template Predicted Secondary structure									.	.
Template SS confidence
		321	.	.	.	.	.	.			.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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