Job Description P39366 Confidence 100.00% Date Thu Jan 5 11:59:57 GMT 2012 Rank 32 Aligned Residues 330 % Identity 11% Template c3ct9B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:acetylornithine deacetylase; PDBTitle: crystal structure of a putative zinc peptidase (np_812461.1) from2 bacteroides thetaiotaomicron vpi-5482 at 2.31 a resolution Resolution 2.31 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		S	V	Q	E	T	L	F	S	L	L	Q	H	N	A	I	S	G	H	E	N	A	V	A	D	V	M	L	C	E	F	R	R	Q	A	K	E	V	W	R	D	R	L	G	N	V	V	A	R	Y	G	S	D	K	P	D	A	L	R	L	M	I	F	A	H	M	D	E	V	G	F	M	V	R	K	I	E	P	.	S	G
Query Conservation																																																																															.
Alig confidence																																							.	.																	.																						.
Template Conservation																																							.	.																	.
Template Sequence		E	A	V	S	L	L	K	S	L	I	S	I	P	S	I	S	R	E	E	T	Q	A	A	D	F	L	Q	N	Y	I	E	A	E	G	X	Q	T	.	.	G	R	K	G	N	N	V	W	C	L	S	P	X	F	D	K	.	P	T	I	L	L	N	S	H	I	D	T	V	K	P	V	K	D	P	F	T	P	R	E	E
Template Known Secondary structure													S			B	T	T															T	T	T				.	.				T	T							T	T				.											B							S	S
Template Predicted Secondary structure																																							.	.																	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.
Query SS confidence																																																									.	.	.
Query Sequence		F	L	R	F	E	R	V	G	G	P	A	Q	V	T	M	A	G	S	I	V	T	L	T	G	D	K	G	P	V	M	G	C	I	G	I	K	S	Y	H	F	A	K	G	D	E	R	T	Q	S	P	S	V	D	K	L	.	.	.	W	I	D	I	G	A	K	D	K	D	D	A	I	R	M	G	I	Q	V	G	T	P
Query Conservation																																																									.	.	.
Alig confidence																														.																											.	.	.
Template Conservation																														.
Template Sequence		N	G	K	L	Y	G	L	G	S	N	D	A	G	A	S	V	V	S	L	L	Q	V	F	L	Q	L	C	R	.	T	S	Q	N	Y	N	L	I	Y	L	A	S	C	E	E	E	V	S	G	K	E	G	I	E	S	V	L	P	G	L	P	P	V	S	F	A	I	V	G	E	P	T	E	X	Q	P	A	I	A	E	K
Template Known Secondary structure		T	T					T	T	T	T	T	T															T	T	.	S			S	S										T	T	T	T		T	T	S	G	G	G	T	T	T	T	S				S								S	T	T
Template Predicted Secondary structure																														.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		V	T	L	Y	N	P	P	Q	L	L	A	N	D	L	V	C	S	K	A	L	D	D	R	L	G	C	T	A	L	L	G	V	A	D	A	I	S	T	M	E	L	D	I	A	V	Y	.	.	L	V	A	S	V	Q	E	E	F	N	I	R	G	I	V	P	V	L	R	R	V	K	P	D	L	A	I	G	I	D	I	T
Query Conservation																																																.	.
Alig confidence																						.																										.	.
Template Conservation																						.
Template Sequence		G	L	X	V	L	D	V	T	A	T	G	K	A	G	H	A	A	R	D	E	.	G	D	N	A	I	Y	K	V	L	N	D	I	A	W	F	R	D	Y	R	F	E	K	E	S	P	L	L	G	P	V	K	X	S	V	T	V	I	N	A	G	T	Q	H	N	V	V	P	D	K	C	T	F	V	V	D	I	R	S	N
Template Known Secondary structure													B			B	T	T	S	S		.		B		T	T	G	G	G													S			B	T	T	T	B	S												S	S	T	T	B
Template Predicted Secondary structure																						.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	C	D	T	P	D	L	H	D	Y	S	E	V	R	I	N	Q	G	V	G	I	T	C	L	N	Y	H	G	R	G	T	L	A	G	L	I	T	P	P	R	L	I	R	M	L	E	Q	T	A	L	E	H	N	I	P	V	Q	R	E	V	A	P	G	V	I	T	E	T	G	Y	I	Q	V	E	Q	D	G	I	P
Query Conservation
Alig confidence																					.	.	.	.																														.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																					.	.	.	.																														.	.	.	.	.	.	.	.	.	.											.	.
Template Sequence		E	L	Y	S	N	E	D	L	F	A	E	I	R	K	H	I	A	C	D	.	.	.	.	A	K	A	R	S	F	R	L	N	S	S	R	I	D	E	K	H	P	F	V	Q	K	A	V	K	X	G	R	I	.	.	.	.	.	.	.	.	.	.	P	F	G	S	P	T	L	S	D	Q	.	.	A	L	X	S	F	A
Template Known Secondary structure		T	T												T	T			S		.	.	.	.				S		S									T	T	S									T	T			.	.	.	.	.	.	.	.	.	.						S			G	G	.	.	G	G			S
Template Predicted Secondary structure																					.	.	.	.																														.	.	.	.	.	.	.	.	.	.											.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270					.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.											300	.	.	.	.	.	.	.	.	.			310	.	.	.	.	.
		318	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		C	A	S	L	S	I	P	.	C	R	Y	T	H	S	P	A	E	V	A	S	L	R	D	L	T	D	C	I	R	L	L	T	A	L	A	G	M	S
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		S	V	K	I	G	P	G	R	S	S	R	S	H	T	A	E	E	Y	I	X	L	K	E	I	E	E	A	I	G	I	Y	L	D	L	L	D	G	L
Template Known Secondary structure							S	S		G	G	G	T	T	S	T	T																				T	T
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions