Job Description P39366 Confidence 100.00% Date Thu Jan 5 11:59:57 GMT 2012 Rank 17 Aligned Residues 345 % Identity 12% Template c2qyvB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:xaa-his dipeptidase; PDBTitle: crystal structure of putative xaa-his dipeptidase (yp_718209.1) from2 haemophilus somnus 129pt at 2.11 a resolution Resolution 2.11 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		V	Q	E	T	L	F	S	L	L	Q	H	N	A	I	S	G	H	E	N	A	V	A	D	V	M	L	C	E	F	R	R	Q	A	K	E	V	W	R	D	R	L	G	N	V	V	A	R	Y	G	S	D	K	.	.	P	D	A	L	R	L	M	I	F	A	H	M	D	E	V	G	F	M	V	R	K	I	E	P	S	G
Query Conservation																																																						.	.
Alig confidence																																																						.	.
Template Conservation
Template Sequence		L	W	Q	W	F	D	Q	I	C	A	I	P	H	P	S	Y	K	E	E	Q	L	A	Q	F	I	I	N	W	A	K	T	K	G	F	F	A	E	R	D	E	V	G	N	V	L	I	R	K	P	A	T	V	G	X	E	N	R	K	P	V	V	L	Q	A	H	L	D	X	V	P	Q	Q	D	P	I	L	P	Y	I	D
Template Known Secondary structure												S			B	T	T																T	T							T	T											T	T		T	T	B									S		B
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		F	L	R	F	E	R	V	G	G	P	A	Q	V	T	M	A	G	S	I	V	T	L	T	G	D	K	G	P	V	M	G	C	I	G	I	K	S	Y	H	F	A	K	G	D	E	.	.	.	R	T	Q	S	P	S	V	D	K	L	W	I	D	I	G	A	K	D	K	D	D	A	I	R	M	G	I	Q	V	G	T	P
Query Conservation																																															.	.	.
Alig confidence																																															.	.	.
Template Conservation
Template Sequence		G	D	W	V	K	A	K	G	T	T	L	G	A	D	N	G	I	G	X	A	S	A	L	A	V	L	E	S	N	D	I	A	H	P	E	L	E	V	L	L	T	X	T	E	E	R	G	X	E	G	A	I	G	L	R	P	N	W	L	R	S	E	I	L	I	N	T	D	T	E	E	N	G	E	I	Y	I	G	C	A
Template Known Secondary structure		S	S					T	T	B																				S	S				S	S							S		T	T	T	T						T			S	S					S										T	T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		160	.	.	.	.	.	.	.	.	.	170																			.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.																																				.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.																																				.	.
Query Sequence		V	T	L	Y	N	P	P	Q	L	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	L	V	C	S	K	A	L	D	D	R	.	.	L	G	C	T	A	L	L	G	V	A	D	A	I	S	T	M	E	L	D	I	A	V	Y	L	V	A	S	V	Q	E	E	F	N	I	R	.	.
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.																																				.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.																																				.	.
Template Conservation
Template Sequence		G	G	E	N	A	D	L	E	L	P	I	E	Y	Q	V	N	N	F	E	H	C	Y	Q	V	V	L	K	G	L	R	G	G	H	S	G	V	D	I	H	T	G	R	A	N	A	I	K	V	L	L	R	F	L	A	E	L	Q	Q	N	Q	P	H	F	D	F	T	L	A	N	I	R	G	G	S	I	R	N	A	I	P
Template Known Secondary structure																				S														B	T	T	T	T	T	T	S	S																				T	T												S		T	T	B
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	S	V	A	T	L	V	F	N	G	D	I	T	V	L	Q	S	A	V	Q	K	F	A	D	V	I	K	A	E	L	A	L	T	E	P	N	L	I	F	T	L	E	K	V	E	K	P	Q	Q	V	F	S	S	Q	C	T	K	N	I	I	H	C	L	N	V	L	P	N	G	V	V	R	N	S	D	V	I	E	N
Template Known Secondary structure												S																					T	T	T		T	T												S																											S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
													218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	G	I	V	P	V	L	R	R	V	K	P	D	L	A	I	G	I	D	I	T	P	S	C	D	T	P	D	L	H	D	Y	S	E	V	R	I	N	Q	G	V	G	I	T	C	L	N	Y	H	G	R	G	T	L	A	G	L	I	T	P	P	R	L	I	R	M	L	E	Q	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.
Template Sequence		V	V	E	T	S	L	S	I	G	V	L	K	T	E	D	N	F	V	R	S	T	X	L	V	R	S	L	I	E	S	G	K	S	Y	V	A	S	L	L	K	S	L	A	S	L	A	Q	G	N	.	.	.	.	.	.	I	N	L	S	G	D	Y	P	G	W	E	P	Q	S	H	S	D	I	L	D	L	T	K	T	I
Template Known Secondary structure																T	T											S	S																		T	T			.	.	.	.	.	.										B				S
Template Predicted Secondary structure																																																			.	.	.	.	.	.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390							.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		287	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		A	L	E	H	.	N	I	P	V	Q	R	E	V	A	P	G	V	I	T	E	T	G	Y	I	Q	V	E	Q	D	G	I	P	C	A	S	L	S	I	P	C	R	Y	T	H	S	P	A	E	V	A	S	L	R	D	L	T	D	C	I	R	L	L	T	A	L	A	G	M	S	A	A
Query Conservation						.
Alig confidence						.							.
Template Conservation													.
Template Sequence		Y	A	Q	V	L	G	T	D	P	E	I	.	K	V	I	H	A	G	L	E	C	G	L	L	K	K	I	Y	P	T	I	D	X	V	S	I	G	P	T	I	R	N	A	H	S	P	D	E	K	V	H	I	P	A	V	E	T	Y	W	K	V	L	T	G	I	L	A	H	I	P	S
Template Known Secondary structure							S	S					.				S	S			T									T	T	S											S	T	T	S	T	T																					T			B
Template Predicted Secondary structure													.
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.