Job Description P39366 Confidence 99.92% Date Thu Jan 5 11:59:57 GMT 2012 Rank 53 Aligned Residues 330 % Identity 18% Template c2ijzF_ PDB info PDB header:hydrolase Chain: F: PDB Molecule:probable m18-family aminopeptidase 2; PDBTitle: crystal structure of aminopeptidase Resolution 3.00 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.									40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80
Predicted Secondary structure																														.	.	.	.	.	.	.	.																																						.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.																																						.	.	.
Query Sequence		L	L	Q	H	N	A	I	S	G	H	E	N	A	V	A	D	V	M	L	C	E	F	R	R	Q	A	K	E	.	.	.	.	.	.	.	.	V	W	R	D	R	L	G	N	V	V	A	R	Y	G	S	D	K	P	D	A	L	R	L	M	I	F	A	H	M	D	E	V	G	F	M	V	R	.	.	.	K	I	E	P
Query Conservation																														.	.	.	.	.	.	.	.																																						.	.	.
Alig confidence																														.	.	.	.	.	.	.	.																																						.	.	.
Template Conservation
Template Sequence		L	I	D	F	L	K	A	S	P	T	P	F	H	A	T	A	S	L	A	R	R	L	E	A	A	G	Y	R	R	L	D	E	G	G	R	Y	Y	V	T	R	N	D	S	S	L	I	A	I	R	L	G	S	P	L	E	S	G	F	R	L	V	G	A	H	T	D	S	P	C	L	R	V	K	P	N	P	E	I	A	R
Template Known Secondary structure				S	S	S	T	T	T										S												S										T	T	T	T											S	T	T												S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		81	.	.			.	.	.	.	.	.	90	.							.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure					.	.									.	.	.	.	.	.
Query SS confidence					.	.									.	.	.	.	.	.
Query Sequence		S	G	F	.	.	L	R	F	E	R	V	G	G	.	.	.	.	.	.	P	A	Q	V	T	M	A	G	S	I	V	T	L	T	G	D	K	G	P	V	M	G	C	I	G	I	K	S	Y	H	F	A	K	G	D	E	R	T	Q	S	P	S	V	D	K	L	W	I	D	I	G	A	K	D	K	D	D	A	I	R	M
Query Conservation					.	.									.	.	.	.	.	.
Alig confidence					.	.									.	.	.	.	.	.																																			.
Template Conservation																																																							.
Template Sequence		N	G	F	L	Q	L	G	V	E	V	Y	G	G	A	L	F	A	P	W	F	D	R	D	L	S	L	A	G	R	V	T	F	R	A	N	G	K	L	E	S	R	L	V	D	F	R	K	A	I	A	V	I	P	.	N	L	N	P	I	N	A	Q	N	E	L	P	P	I	I	A	Q	L	A	P	G	E	T	A	D	V
Template Known Secondary structure		T	T										S				S	T	T	S	B	S						S					T	T	T								S				B	B					S	S	.								S	T	T										S
Template Predicted Secondary structure																																																							.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		G	I	Q	V	G	T	P	V	T	L	Y	N	P	P	Q	L	L	A	.	.	N	D	L	V	C	S	K	A	L	D	D	R	L	G	C	T	A	L	L	G	V	A	D	A	I	S	T	M	E	L	D	I	A	V	Y	L	V	A	S	V	Q	E	E	F	N	I	R	G	I	V	P	V	L	R	R	V	K	P	D	L
Query Conservation																				.	.
Alig confidence																				.	.																						.	.	.
Template Conservation																																											.	.	.
Template Sequence		V	L	D	Y	E	L	S	F	Y	D	T	Q	S	A	A	V	V	G	L	N	D	E	F	I	A	G	A	R	L	D	N	L	L	S	C	H	A	G	L	E	A	.	.	.	L	L	N	A	E	G	D	E	N	C	I	L	V	C	T	D	H	E	E	V	G	S	C	S	H	C	G	A	D	G	P	F	L	E	Q	V
Template Known Secondary structure			S		S			T	T							S						S	S	S	S	S				S	S		S	S	S	S	T	T	T	T	T	T	.	.	.	T	T	T	T	T	S		S	S	S								S		T	T	T	T						S	S			T	T	T	S
Template Predicted Secondary structure																																											.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
																					231	.	.	.	.	.	.	.	.	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	G	I	D	I	T	P	S	C	D	.	.	.	T	P	D	L	H	D	Y	S	E	V	R	I	N	Q	G	V	G	I	T	C	L	N	Y	H	G	R	G	T	L	A	G	L	I	T	P	P	R	L	I	R	M	L	E	Q	T	A	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.																					.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.
Template Sequence		L	R	R	L	L	P	E	G	D	A	F	S	R	A	I	Q	R	S	L	L	V	S	A	D	N	A	H	G	V	H	P	N	Y	A	D	R	H	D	A	N	H	G	P	A	L	N	G	G	P	V	I	K	I	.	.	.	.	.	.	N	S	N	Q	R	Y	A	T	N	S	E	T	A	G	F	F	R	H	L	C	Q
Template Known Secondary structure				S	S	S	S	S	S	S	S	T	T	T	T	T	S	S														S	S		G	G	G			S	S				S	S	S				B				.	.	.	.	.	.		S	S	S			S							G	G	G	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.							.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.				300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		E	H	N	I	P	V	Q	R	E	V	A	.	.	.	P	G	V	I	T	E	T	G	Y	I	Q	V	E	Q	D	G	I	P	C	A	S	L	S	I	P	C	R	Y	T	H	S	P	A	E	V	A	S	L	R	D	L	T	D	C	I	R	L	L	T	A	L	A
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		D	S	E	V	P	V	Q	S	F	V	T	R	S	D	M	G	C	G	S	T	I	G	P	I	T	A	S	Q	V	G	V	R	T	V	D	I	G	L	P	T	F	A	M	H	S	I	R	E	L	A	G	S	H	D	L	A	H	L	V	K	V	L	G	A	F	Y
Template Known Secondary structure			T						B					S	S								S	T	T	T	G	G	G	S	S												S		S	S	S	S					S	S							T	T					T
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions