Job Description P39366 Confidence 99.76% Date Thu Jan 5 11:59:57 GMT 2012 Rank 60 Aligned Residues 343 % Identity 15% Template c2gljR_ PDB info PDB header:hydrolase Chain: R: PDB Molecule: PDBTitle: crystal structure of aminopeptidase i from clostridium2 acetobutylicum Resolution 3.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		S	V	Q	E	T	L	F	S	L	L	Q	H	N	A	I	S	G	H	E	N	A	V	A	D	V	M	L	C	E	F	R	R	Q	A	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	W	R	D	R	L	G	N	V	V	A	R	Y	G	S	D	K	P	D	A	L	R	L	.	M	I
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		E	V	F	A	L	G	D	R	F	K	N	F	I	S	N	C	K	T	E	R	E	C	V	T	E	L	I	K	T	A	E	K	S	G	Y	R	N	I	E	D	I	L	A	K	G	E	T	L	K	E	G	D	K	V	Y	A	N	N	R	G	K	G	L	I	M	F	L	I	G	K	E	P	L	Y	T	G	F	K	I	L
Template Known Secondary structure						T	T														S	S	T								S			S	S				T	T				S	T	T	T	T			T	T								T	T	T									S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.						.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																			.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	H	M	D	E	V	G	F	M	V	R	K	I	E	P	S	.	.	.	.	.	G	F	L	R	F	E	R	V	G	G	P	A	Q	V	T	M	A	G	S	I	V	T	L	T	G	D	K	G	P	V	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	I	G	I	K	S	Y	H	F	A
Query Conservation																			.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	H	I	D	S	P	R	L	D	L	K	Q	N	P	L	Y	E	D	T	D	L	A	M	L	E	T	H	Y	Y	G	G	I	K	K	Y	Q	W	V	T	L	P	L	A	I	H	G	V	I	V	K	K	D	G	T	I	V	N	V	C	V	G	E	D	D	N	D	P	V	F	G	V	S	D	I	L	V	H	L	A
Template Known Secondary structure									B	B				S	S						S	S	S								B	S				S				S	S	S											T	T								B	S		S	T	T	S			B							G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		124	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.																.	150	.	.	.	.	.	.	.	.	.	160	.	.	.									.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Query SS confidence				.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Query Sequence		K	G	.	.	.	D	E	R	T	Q	S	P	S	V	D	K	L	W	I	D	I	G	A	K	D	K	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	R	M	G	I	Q	V	G	T	P	V	T	L	Y	.	.	.	.	.	.	.	.	N	P	P	Q	L	L	A	N	D	L	V	C	S	K
Query Conservation				.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Alig confidence				.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	Q	L	E	K	K	A	S	K	V	I	E	G	E	D	L	N	I	L	I	G	S	I	P	L	K	D	G	E	E	K	Q	K	V	K	H	N	I	M	K	I	L	N	E	K	Y	D	I	S	E	E	D	F	V	S	A	E	L	E	I	V	P	A	G	K	A	R	D	Y	G	F	D	R	S	M	V	M	G	Y
Template Known Secondary structure		G	G	T	T	S		T	T		S	S			S								S				S	T	T				S														S	S				S	T	T	G	G	G	B								S						S	T	T							T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.																				230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	D	D	R	L	G	C	T	A	L	L	G	V	A	D	A	I	S	T	M	E	L	D	I	A	V	Y	L	V	A	S	V	Q	E	E	F	N	I	R	G	I	V	P	V	L	R	R	V	K	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	I	G	I	D	I	T	P
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.
Template Sequence		G	Q	D	D	R	I	C	A	Y	T	S	F	E	A	M	L	E	M	K	N	.	.	A	K	K	T	C	I	T	I	L	V	D	K	E	E	V	G	S	I	G	A	T	G	M	Q	S	K	F	F	E	N	T	V	A	D	I	M	S	D	E	L	K	L	R	K	A	L	Y	N	S	E	M	L	S	S	D	V	S	A
Template Known Secondary structure		T																T			S	.	.		S	S										G	G	G	T			T	T	T	T	S	S	S	T	T									T				S								T						B
Template Predicted Secondary structure																						.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		239	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.						300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure					.	.	.																																																											.	.	.	.	.
Query SS confidence					.	.	.																																																											.	.	.	.	.
Query Sequence		S	C	D	.	.	.	T	P	D	L	H	D	Y	S	E	V	R	I	N	Q	G	V	G	I	T	C	L	N	Y	H	G	R	G	T	L	A	G	L	I	T	P	P	R	L	I	R	M	L	E	Q	T	A	L	E	H	N	I	P	V	Q	R	E	V	A	.	.	.	.	.	P	G	V	I	T	E	T	G	Y	I	Q
Query Conservation					.	.	.																																																											.	.	.	.	.
Alig confidence					.	.	.																					.																																						.	.	.	.	.											.
Template Conservation																												.																																																					.
Template Sequence		A	F	D	P	N	Y	P	N	V	M	E	K	R	N	S	A	Y	L	G	K	G	I	V	F	N	K	.	Y	T	G	S	R	G	K	S	G	C	N	D	A	N	P	E	Y	I	A	E	L	R	R	I	L	S	K	E	S	V	N	W	Q	T	A	E	L	G	K	V	D	Q	G	G	G	G	T	I	A	Y	I	L	.
Template Known Secondary structure		B			T	T			T	T	S		S	T	T	S	B		T	T	S					B	S	.				S	T	T	S		S	S																		T									S	S	S	S	S	S	S					T					.
Template Predicted Secondary structure																												.																																																					.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.		.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	Q	D	G	I	P	C	A	S	L	S	I	P	C	R	Y	T	H	S	P	A	E	V	A	S	L	R	D	L	T	D	C	I	R	L	L	T	A	L	A
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	A	E	Y	G	M	Q	V	I	D	C	G	V	A	L	L	N	X	H	A	P	W	E	I	S	S	K	A	D	I	Y	E	T	K	N	G	Y	S	A	F	L
Template Known Secondary structure		.		T	T	T		B			B	B						S	T	T	S	S	S																	T	T	S
Template Predicted Secondary structure		.
Template SS confidence
			424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.