Job Description P39366 Confidence 99.93% Date Thu Jan 5 11:59:57 GMT 2012 Rank 50 Aligned Residues 346 % Identity 16% Template c2glfB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:probable m18-family aminopeptidase 1; PDBTitle: crystal structure of aminipeptidase (m18 family) from thermotoga2 maritima Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40															.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	Q	E	T	L	F	S	L	L	Q	H	N	A	I	S	G	H	E	N	A	V	A	D	V	M	L	C	E	F	R	R	Q	A	K	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	R	D	R	L	G	N	V	V	A	R	Y	G	S	D	K	P	D	A	L	R	L	M	I	F	A	H	M	D
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	E	A	F	S	K	E	Y	X	E	F	X	S	K	A	K	T	E	R	X	T	V	K	E	I	K	R	I	L	D	E	S	G	F	V	P	L	E	D	F	A	G	D	P	X	N	X	T	V	Y	A	V	N	R	G	K	A	I	A	A	F	R	V	V	D	D	L	K	R	G	L	N	L	V	V	A	H	I	D
Template Known Secondary structure															T	T		S	S															T	T				G	G	G			S		T	T	S							S	S	S	S									S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		70	.	.	.	.	.	.				.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.																	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.
Predicted Secondary structure									.	.	.							.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence									.	.	.							.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		E	V	G	F	M	V	R	.	.	.	K	I	E	P	S	G	.	.	F	L	R	F	E	R	V	G	G	P	A	Q	V	T	M	A	G	S	I	V	T	L	T	G	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	V	M	G	C	I	G	I	K	S	Y	H	F	A	.	K	G	D	E
Query Conservation									.	.	.							.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence									.	.	.							.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		S	P	R	L	D	F	K	P	N	P	L	I	E	D	E	Q	I	A	L	F	K	T	H	Y	Y	G	G	I	K	K	Y	H	W	L	S	I	P	L	E	I	H	G	V	L	F	K	N	D	G	T	E	I	E	I	H	I	G	D	K	P	E	D	P	V	F	T	I	P	D	L	L	P	H	L	D	K	E	D	A	K
Template Known Secondary structure															S	S	S										S	S			G	G	G	G	T	T	S											T	T	S								S	S	S	T	T	S			B							T	T	T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.															.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.									.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Query Sequence		R	T	Q	S	P	S	V	D	K	L	W	I	D	I	G	A	K	D	K	D	D	A	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	G	I	Q	V	G	T	P	V	T	L	Y	N	P	P	Q	L	L	A	N	D	.	.	.	.	.	.	.	.	L	V	C	S	K	A	L	D	D	R	L	G	C
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	E	K	F	K	G	E	N	L	X	L	I	A	G	T	I	P	L	S	G	E	E	K	E	A	V	K	T	N	V	L	K	I	L	N	E	X	Y	G	I	T	E	E	D	F	V	S	G	E	I	E	V	V	P	A	F	S	P	R	E	V	G	X	D	R	S	L	I	G	A	Y	G	Q	D	D	R	I	C	A
Template Known Secondary structure		T	T	S	S	S		G	G	G											T	T		S	S																			G	G	G	G	T	T															S	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230																										.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	L	L	G	V	A	D	A	I	S	T	M	E	L	D	I	A	V	Y	L	V	A	S	V	Q	E	E	F	N	I	R	G	I	V	P	V	L	R	R	V	K	P	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	G	I	D	I	T	P	S	C
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.
Template Sequence		Y	T	A	L	R	A	L	L	S	.	.	.	A	N	P	E	K	S	I	G	V	I	F	F	D	K	E	E	I	G	S	D	G	N	T	G	A	K	A	R	F	Y	L	K	A	L	R	Q	I	L	K	X	Q	G	A	K	D	S	E	F	V	L	D	E	V	L	E	N	T	S	V	I	S	G	D	V	C	A	A	V
Template Known Secondary structure											.	.	.				S	S								S	S	G	G	G	T	S		S	T	T	S	T	T	S	S													T	T		S	S											S
Template Predicted Secondary structure											.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300						.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																								.	.																																							.	.	.	.	.
Query SS confidence																								.	.																																							.	.	.	.	.
Query Sequence		D	T	P	D	L	H	D	Y	S	E	V	R	I	N	Q	G	V	G	I	T	C	L	.	.	N	Y	H	G	R	G	T	L	A	G	L	I	T	P	P	R	L	I	R	M	L	E	Q	T	A	L	E	H	N	I	P	V	Q	R	E	V	A	P	.	.	.	.	.	G	V	I	T	E	T	G	Y	I	Q	V	E	Q
Query Conservation																								.	.																																							.	.	.	.	.
Alig confidence																								.	.																																							.	.	.	.	.								.	.
Template Conservation																																																																												.	.
Template Sequence		N	P	P	Y	K	D	V	H	D	L	H	N	A	P	K	L	G	Y	G	V	A	L	V	K	Y	T	G	A	R	G	K	Y	S	T	N	D	A	H	A	E	F	V	A	R	V	R	K	V	L	N	E	Q	G	V	I	W	Q	V	A	T	L	G	K	V	D	Q	G	G	G	G	T	I	A	K	.	.	F	F	A	E
Template Known Secondary structure			G	G	G	G	G	G	S		G	G	G				T	T	S						S				S	T	T	T	T	T																			T	T								S	S	S	T	T	S						T			.	.				T
Template Predicted Secondary structure																																																																												.	.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.			.	.	410	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	I	P	C	A	S	L	S	I	P	C	R	Y	T	H	S	P	A	E	V	A	S	L	R	D	L	T	D	C	I	R	L	L	T	A	L	A	G	M	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	S	D	V	I	D	X	G	P	A	L	L	G	X	H	S	P	F	E	I	S	S	K	A	D	L	F	E	T	Y	V	A	Y	R	S	L	X	E	K	L
Template Known Secondary structure		T	T											B	S	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.