Job Description P39366 Confidence 100.00% Date Thu Jan 5 11:59:57 GMT 2012 Rank 9 Aligned Residues 330 % Identity 28% Template c2cf4A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein ph0519; PDBTitle: pyrococcus horikoshii tet1 peptidase can assemble into a2 tetrahedron or a large octahedral shell Resolution 3.08 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	Q	E	T	L	F	S	L	L	Q	H	N	A	I	S	G	H	E	N	A	V	A	D	V	M	L	C	E	F	R	R	Q	A	K	E	V	W	R	D	R	L	G	N	V	V	A	R	Y	G	S	D	K	P	D	A	L	R	L	M	I	F	A	H	M	D	E	V	G	F	M	V	R	K	I	E	P	S	G	F
Query Conservation
Alig confidence																																				.																			.	.	.
Template Conservation																																				.																			.	.	.
Template Sequence		S	X	I	E	K	L	K	K	F	T	Q	I	P	G	I	S	G	Y	E	E	R	I	R	E	E	I	I	R	E	I	K	D	F	A	.	D	Y	K	V	D	A	I	G	N	L	I	V	E	L	G	E	G	E	.	.	.	E	R	I	L	F	X	A	H	X	D	E	I	G	L	L	I	T	G	I	T	D	E	G	K
Template Known Secondary structure													S				T	T												T	T	T	T	S	S	.						S	S	S							S		S	S	.	.	.																					T	T	S
Template Predicted Secondary structure																																				.																			.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	F	E	R	V	G	G	P	A	Q	V	T	M	A	G	S	I	V	T	L	T	G	D	K	G	P	V	M	G	C	I	G	I	K	S	Y	H	F	A	K	G	D	E	R	T	Q	S	P	S	V	D	K	L	W	I	D	I	G	A	K	D	K	D	D	A	I	R	M	G	I	Q	V	G	T	P	V	T	L	Y
Query Conservation
Alig confidence																																									.																														.
Template Conservation																																									.																														.
Template Sequence		L	R	F	R	K	V	G	G	I	D	D	R	L	L	Y	G	R	H	V	N	V	V	T	E	K	G	I	L	D	G	V	I	G	A	T	P	P	H	L	.	S	L	E	R	D	K	S	V	I	P	W	Y	D	L	V	I	D	I	G	A	E	S	K	E	E	A	L	E	L	.	V	K	P	L	D	F	A	V	F	K
Template Known Secondary structure								S				G	G	G	T	T	T								S	S													S	S	.		S	S				S				T	T	S			B	B				S	S						T	T	.			T	T
Template Predicted Secondary structure																																									.																														.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	P	Q	L	L	A	N	D	L	V	C	S	K	A	L	D	D	R	L	G	C	T	A	L	L	G	V	A	D	A	I	S	T	M	E	L	D	I	A	V	Y	L	V	A	S	V	Q	E	E	F	N	I	R	G	I	V	P	V	L	R	R	V	K	P	D	L	A	I	G	I	D	I	T	P	S	C	D	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	H	F	S	V	L	N	G	K	Y	V	S	T	R	G	L	D	D	R	F	G	V	V	A	L	I	E	A	I	K	D	L	V	D	H	E	L	E	G	K	V	I	F	A	F	T	V	Q	E	E	V	G	L	K	G	A	K	F	L	A	N	H	Y	Y	P	Q	Y	A	F	A	I	D	S	F	A	C	C	S	P	L
Template Known Secondary structure								S	S	S					T	T																S	S	G	G	G			S	S								S	S		T	T	T	S							T	T	T				S	S										S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	H	D	Y	S	E	V	R	I	N	Q	G	V	G	I	T	C	L	N	Y	H	G	R	G	T	L	A	G	L	I	T	P	P	R	L	I	R	M	L	E	Q	T	A	L	E	H	N	I	P	V	Q	R	E	V	A	P	G	V	I	T	E	T	G	Y	I	Q	V	E	Q	D	G	I	P	C	A	S	L	S	I
Query Conservation
Alig confidence			.	.	.	.	.	.																					.	.	.	.	.																						.													.	.	.
Template Conservation			.	.	.	.	.	.																					.	.	.	.	.																						.													.	.	.
Template Sequence		T	.	.	.	.	.	.	G	D	V	K	L	G	K	G	P	V	I	R	A	V	D	N	S	A	I	Y	.	.	.	.	.	S	R	D	L	A	R	K	V	W	S	I	A	E	K	N	G	I	E	I	Q	I	.	G	V	T	G	G	G	T	D	A	S	A	F	.	.	.	Q	D	R	S	K	T	L	A	L	S	V
Template Known Secondary structure		S	.	.	.	.	.	.	T	T			T	T	S									S	S		B		.	.	.	.	.														T	T	T						.				S	S			G	G	G	G	T	.	.	.	T	T	S	S
Template Predicted Secondary structure			.	.	.	.	.	.																					.	.	.	.	.																						.													.	.	.
Template SS confidence
		236							.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.						.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.				290	.	.	.	.	.	.	.	.	.	300
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	C	R	Y	T	H	S	P	A	E	V	A	S	L	R	D	L	T	D	C	I	R	L	L	T	A	L	A	G	M	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	I	K	Y	L	H	S	E	V	E	T	L	H	L	N	D	L	E	K	L	V	K	L	I	E	A	L	A	F	E	L
Template Known Secondary structure					S	T	T	T	T	T													T	T	S	S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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