Job Description P39366 Confidence 99.84% Date Thu Jan 5 11:59:57 GMT 2012 Rank 55 Aligned Residues 339 % Identity 15% Template c1y7eA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable m18-family aminopeptidase 1; PDBTitle: the crystal structure of aminopeptidase i from borrelia burgdorferi2 b31 Resolution 3.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.															40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		S	V	Q	E	T	L	F	S	L	L	Q	H	N	A	I	S	G	H	E	N	A	V	A	D	V	M	L	C	E	F	R	R	Q	A	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	W	R	D	R	L	G	N	V	V	A	R	Y	G	S	D	K	P	.	D	A	L	R	L	M	I	F	A	H	M
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		Q	I	L	N	F	S	E	S	Y	K	K	F	I	S	K	F	K	T	E	R	E	V	T	A	Y	A	L	D	K	A	K	K	L	G	F	I	N	A	E	E	K	K	N	L	X	P	G	D	K	I	F	Y	T	C	R	E	K	S	V	A	F	A	I	I	G	K	N	P	I	E	D	G	X	N	F	I	V	S	H	T
Template Known Secondary structure																			S														T	T	T				S	T	T						T	T						B		S	S	S		B							S	S		G	G	G								B
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.						.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		D	E	V	G	F	M	V	R	K	I	E	P	S	.	.	.	.	.	G	F	L	R	F	E	R	V	G	G	P	A	Q	V	T	M	A	G	S	I	V	T	L	T	G	D	K	G	P	V	M	G	C	I	G	I	K	S	Y	H	F	A	K	G	D	E	R	T	Q	S	P	S	V	D	K	L	W	I	D	I	G	A
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.
Template Conservation
Template Sequence		D	S	P	R	L	D	A	K	P	S	P	I	S	E	E	N	E	L	T	F	I	K	T	N	Y	Y	G	G	I	K	K	Y	Q	W	L	S	T	P	L	S	I	R	G	V	V	F	L	K	N	G	E	K	V	E	I	N	I	G	D	N	E	N	D	P	V	F	V	I	P	D	I	L	N	L	K	I	L	I	G	S
Template Known Secondary structure					B					S	S						T	T									B	S	S			G	G	G	G	T	T												T	T									S	S	S	T	T				B
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		144	.	.	.	.	.	150															.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.									.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Query Sequence		K	D	K	D	D	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	M	G	I	Q	V	G	T	P	V	T	L	Y	N	P	P	Q	L	L	A	N	D	L	V	C	S	.	.	.	.	.	.	.	.	K	A	L	D	D	R	L	G	C	T	A	L	L	G	V	A	D	A	I	S	T	M	E	L	D
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.																							.
Template Conservation																																																																															.
Template Sequence		L	P	I	E	T	K	E	K	N	K	V	K	L	A	T	L	Q	L	I	K	E	K	Y	K	I	E	E	E	D	F	V	S	S	E	I	E	I	V	P	A	G	T	A	K	D	V	G	F	D	K	A	L	I	G	A	Y	G	Q	D	D	K	I	C	V	F	T	S	L	E	S	I	F	D	L	E	E	T	.	P	N
Template Known Secondary structure					S		S	S	S																			T	T	T	T	S	S	S								S						T	T	T	T						S	S															S	S	S	S			.		S
Template Predicted Secondary structure																																																																															.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.								.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.
Query Sequence		I	A	V	Y	L	V	A	S	V	Q	E	E	F	N	I	R	G	I	V	P	V	L	R	R	V	K	P	D	L	A	I	G	I	D	I	T	P	S	C	D	T	P	D	L	H	D	Y	S	E	V	R	I	N	Q	G	V	G	I	T	C	L	.	.	.	.	.	.	.	N	Y	H	G	R	G	T	L	A	G	L	I
Query Conservation																																																															.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.
Template Sequence		K	T	A	I	C	F	L	V	D	K	E	E	I	D	S	R	Y	L	E	Y	F	V	S	D	X	I	F	K	I	K	.	.	.	.	.	K	S	E	Y	N	N	L	H	V	Q	K	A	L	W	N	S	K	S	I	S	A	D	V	C	A	A	I	N	P	E	Q	N	A	P	Q	L	G	Y	G	I	P	I	X	K	Y
Template Known Secondary structure		S							B		S	T	T			T	T														S	.	.	.	.	.	S	T	T			T																									T	T	S			T	T	S
Template Predicted Secondary structure																																.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.						.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	P	R	L	I	R	M	L	E	Q	T	A	L	E	H	N	I	P	V	Q	R	E	V	A	P	G	V	I	T	E	T	G	Y	I	Q	V	E	Q	D	G	I	P	C	A	S	L	S	I	P	C	R	Y	T	H	S	P	A	E	V	A	S	L	R	D	L	T	D	C	I	R	L	L	T	A	L
Query Conservation
Alig confidence																																					.	.
Template Conservation																																					.	.
Template Sequence		T	D	A	E	L	V	S	Y	I	R	Q	L	L	N	K	N	N	I	A	W	Q	V	A	T	L	G	K	G	G	T	V	A	K	F	L	.	.	A	G	Y	G	I	R	T	I	D	X	G	P	A	V	I	S	X	H	S	P	X	E	I	T	S	K	F	D	L	Y	N	A	Y	L	A	Y	K	A	F
Template Known Secondary structure																		T																			.	.				T											B	S	T	T	S	S	S																		T
Template Predicted Secondary structure																																					.	.
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400			.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions