Return to main results Retrieve Phyre Job Id

Job DescriptionP76044
Confidence53.07%DateThu Jan 5 12:17:47 GMT 2012
Rank272Aligned Residues141
% Identity13%Templated2pb1a1
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70.........80.........90....... ..100.........110.......
Predicted Secondary structure 

















....


















Query SS confidence 























































. . . .



















Query Sequence  EEVKAAIKETGLPVTTACGGYDGWIGDFIEERRLNGLKQIERILEALAEVGGKGIV. . . . VPAAWGMFTFRLPPMTSPRS
Query Conservation            

                               
  
  

   
 ....                    
Alig confidence 























































....



















Template Conservation 
 
   
   
 
 




                    

  
  
   

 





  

  
     
        
Template Sequence  EQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQ
Template Known Secondary structure  TT

GGGT


TT





TT

TT
SS

GGGSSTT


TT
Template Predicted Secondary structure 








































Template SS confidence 















































































   77..80.........90.........100.........110.........120.........130.........140.........150......
 
   118.120.........130.........140 .........150.... .....160.........170.........180..
Predicted Secondary structure 

...







......










Query SS confidence 






















. . .













. . . . . .



























Query Sequence  LDGDRKMVSDSLRVLEQVAARTG. . . TVVYLEPLNRYQDH. . . . . . MINTLADARRYIVENDLKHVQIIGDFYH
Query Conservation             
      
   
...
    
        ......                        
   
Alig confidence 






















...













......



























Template Conservation                

           
 
 

 


                    

       
 
 
   
Template Sequence  NGDNTQVTLNVLNTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAFQ
Template Known Secondary structure  STTSSGGGTTTS
S


GGGS
TT




TT
Template Predicted Secondary structure 
























Template SS confidence 









































































   157..160.........170.........180.........190.........200.........210.........220.........230
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions