Job Description P76044 Confidence 99.98% Date Thu Jan 5 12:17:47 GMT 2012 Rank 28 Aligned Residues 256 % Identity 18% Template d2glka1 SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 0.94

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		2	.	.	.	.	.	.	.	10	.														.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.								.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.								.	.	.	.	.
Query Sequence		K	I	G	T	Q	N	Q	A	F	F	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	N	I	L	E	K	F	R	Y	I	K	E	M	G	F	D	G	F	E	I	D	.	.	.	.	.	G	K	L	L	V	N	N	.	.	.	.	.	I	E	E	V	K	A	A	I	K	E	T	G	L	P	V	T	T	A
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.								.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.								.	.	.	.	.
Template Conservation
Template Sequence		R	F	T	F	G	L	W	T	V	G	W	Q	G	R	D	P	F	G	D	A	T	R	R	A	L	D	P	V	E	S	V	R	R	L	A	E	L	G	A	H	G	V	T	F	H	D	D	D	L	I	P	F	G	S	S	D	S	E	R	E	E	H	V	K	R	F	R	Q	A	L	D	D	T	G	M	K	V	P	M	A
Template Known Secondary structure											T					B	T	T	B			S	S															T	T												S		T	T																					T		B
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		59	60								.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure				.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.
Query Sequence		C	G	.	.	.	.	.	.	.	G	Y	D	G	W	I	G	D	F	I	E	E	R	R	L	N	G	L	K	Q	I	E	R	I	L	E	A	L	A	E	V	G	G	K	G	I	V	V	P	A	A	W	G	M	F	T	F	R	L	P	P	M	T	S	P	R	S	L	D	G	D	R	K	M	V	S	D	S	L	R	V
Query Conservation				.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.																																														.	.	.	.	.
Template Conservation																																																								.	.	.	.	.
Template Sequence		T	T	N	L	F	T	H	P	V	F	K	D	G	G	F	T	A	N	D	R	D	V	R	R	Y	A	L	R	K	T	I	R	N	I	D	L	A	V	E	L	G	A	E	T	Y	V	A	W	G	G	R	E	G	A	.	.	.	.	.	E	S	G	G	A	K	D	V	R	D	A	L	D	R	M	K	E	A	F	D	L
Template Known Secondary structure						S	S	S	G	G	G	T	T		S	T	T		S	S																					T	T		S							T	T				.	.	.	.	.	S	S	G	G	G
Template Predicted Secondary structure																																																								.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.						.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		132	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.
Predicted Secondary structure											.	.														.	.																					.																							.	.
Query SS confidence											.	.														.	.																					.																							.	.
Query Sequence		L	E	Q	V	A	A	R	T	G	.	.	T	V	V	Y	L	E	P	L	N	R	Y	Q	D	.	.	H	M	I	N	T	L	A	D	A	R	R	Y	I	V	E	N	D	L	K	H	.	V	Q	I	I	G	D	F	Y	H	M	N	I	E	E	D	N	L	A	Q	A	L	H	.	.	D	N	R	D	L	L	G	H	V
Query Conservation											.	.														.	.																					.																							.	.
Alig confidence											.	.														.	.																					.																							.	.
Template Conservation
Template Sequence		L	G	E	Y	V	T	S	Q	G	Y	D	I	R	F	A	I	E	P	K	P	N	E	P	R	G	D	I	L	L	P	T	V	G	H	A	L	A	F	I	E	R	L	E	R	P	E	L	Y	G	V	N	P	E	V	G	H	E	Q	M	A	G	L	N	F	P	H	G	I	A	Q	A	L	W	A	G	K	L	F	H	I
Template Known Secondary structure										T											S	S	S	S	S	S			S	S		S									T	T	S	S	S	G	G	G						B						T	T	T													T	T		B
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		205	.	.	.	.	210	.							.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure									.	.	.	.	.	.										.																								.
Query SS confidence									.	.	.	.	.	.										.																								.
Query Sequence		H	I	A	D	N	H	R	.	.	.	.	.	.	Y	Q	P	G	S	G	T	L	D	.	F	H	A	L	F	E	Q	L	R	A	D	N	Y	Q	G	Y	V	V	Y	E	G	R	I	.	R	A	E	D	P	A	Q	A	Y	R	D	S	L	A	W	L	R	T	C
Query Conservation									.	.	.	.	.	.										.																								.
Alig confidence									.	.	.	.	.	.										.																								.
Template Conservation
Template Sequence		D	L	N	G	Q	N	G	I	K	Y	D	Q	D	L	R	F	G	A	G	D	L	R	A	A	F	W	L	V	D	L	L	E	S	A	G	Y	S	G	P	R	H	F	D	F	K	P	P	R	T	E	D	F	D	G	V	W	A	S	A	A	G	C	M	R	N	Y
Template Known Secondary structure					B			S	S	S	S				B		T	T	S	S																T			S										T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions