Job Description P76044 Confidence 58.08% Date Thu Jan 5 12:17:47 GMT 2012 Rank 236 Aligned Residues 150 % Identity 13% Template d1vpqa_ SCOP info TIM beta/alpha-barrel TM1631-like TM1631-like Resolution 2.20

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		2	.	.	.	.	.	.								.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.								.	.											.								.	.	.	.																																		.	.
Query SS confidence									.	.	.	.	.	.	.								.	.											.								.	.	.	.																																		.	.
Query Sequence		K	I	G	T	Q	N	Q	.	.	.	.	.	.	.	A	F	F	P	E	N	I	.	.	L	E	K	F	R	Y	I	K	E	M	.	G	F	D	G	F	E	I	.	.	.	.	D	G	K	L	L	V	N	N	I	E	E	V	K	A	A	I	K	E	T	G	L	P	V	T	T	A	C	G	G	Y	D	G	W	.	.
Query Conservation									.	.	.	.	.	.	.								.	.											.								.	.	.	.																																		.	.
Alig confidence									.	.	.	.	.	.	.								.	.											.								.	.	.	.																			.															.	.
Template Conservation																																																																	.
Template Sequence		Y	V	G	T	S	G	F	S	F	E	D	W	K	G	V	V	Y	P	E	H	L	K	P	S	Q	F	L	K	Y	Y	W	A	V	L	G	F	R	I	V	E	L	N	F	T	Y	Y	T	Q	P	S	W	R	S	F	V	Q	M	L	R	K	T	P	P	.	D	F	Y	F	T	V	K	T	P	G	S	V	T	H	V	L
Template Known Secondary structure						B		S			S	T	T	B	T	T	T	B		T	T			G	G	G								T	S											S	S	S	S	S										T	T	S		T	.	T														T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
			66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	I	G	D	F	I	E	E	R	R	L	N	G	L	K	Q	I	E	R	I	L	E	A	L	A	E	V	G	G	K	G	I	V	V	P	A	A	W	G	M	F	T	F	R	L	P	P	M	T	S	P	R	S	L	D	G	D	R	K	M	V	S	D	S	L	R	V	L	E	Q	V	A	A	R	T	G	T	V	V	Y
Query Conservation		.
Alig confidence		.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	K	E	G	K	D	P	K	E	D	M	E	N	F	T	R	Q	I	E	P	L	I	E	E	Q	R	L	K	M	T	L	A	Q	F	P	F	S	F	K	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K	N	V	E	Y	L	E	K	L	R	E	S	Y	P	Y	E	L	A
Template Known Secondary structure					T			S																	T	T											T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	P	L	N	R	Y	Q	D	H	M	I	N	T	L	A	D	A	R	R	Y	I	V	E	N	D	L	K	H	V	Q	I	I
Query Conservation
Alig confidence					.	.	.	.	.
Template Conservation					.	.	.	.	.
Template Sequence		V	E	F	.	.	.	.	.	R	H	Y	S	W	D	R	E	E	T	Y	E	F	L	R	N	H	G	I	T	F	V	V	V	D
Template Known Secondary structure					.	.	.	.	.		B	G	G	G		S											T
Template Predicted Secondary structure					.	.	.	.	.
Template SS confidence
		142	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions