Return to main results Retrieve Phyre Job Id

Job DescriptionP76044
Confidence99.97%DateThu Jan 5 12:17:47 GMT 2012
Rank31Aligned Residues251
% Identity14%Templated1tz9a_
SCOP infoTIM beta/alpha-barrel Xylose isomerase-like UxuA-like
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20..... ....30...... ...40.........50.........60.........70.........80.
Predicted Secondary structure 




.






.......














Query SS confidence 















.










. . . . . . .












































Query Sequence  FFPENILEKFRYIKEM. GFDGFEIDGKL. . . . . . . LVNNIEEVKAAIKETGLPVTTACGGYDGWIGDFIEERRLNGLKQI
Query Conservation       
   
      .
   


    .......               

                            
Alig confidence 















.










.......












































Template Conservation   
   
   
    

 
  


  
     
  
  
 
   
      

  
 


 
    
  
   

  

  
Template Sequence  YGAAGDAIPLKHIRQIPGITGVVGTLLNKLPGDVWTVAEIQALKQSVEQEGLALLGIESVAIHDAIKAGTDQRDHYIDNY
Template Known Secondary structure 

TTT

S
TTSTT



SSS
TT



TT

S



T
ST
Template Predicted Secondary structure 




































Template SS confidence 















































































   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   82.......90.........100.........110.. ...
Predicted Secondary structure 

















..............................................


Query SS confidence 






























. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .


Query Sequence  ERILEALAEVGGKGIVVPAAWGMFTFRLPPM. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TSP
Query Conservation     
  
  

   
                ..............................................   
Alig confidence 






























..............................................


Template Conservation 
  

     

  
 




   
 

        

    

                                    
Template Sequence  RQTLRNLGKCGISLVCYSFKPIFGWAKTDLAYENEDGSLSLLFDQAVVENXQPEDXYQLIHSWEEERLQQFQELKAXYAG
Template Known Secondary structure  TT




SS
S


S
TTS
TS
TT


STT
Template Predicted Secondary structure 












































Template SS confidence 















































































   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   116...120.........130.........140.........150.. .......160.........170.........180...... ...
Predicted Secondary structure 









.....













.


Query SS confidence 




































. . . . .

































.


Query Sequence  RSLDGDRKMVSDSLRVLEQVAARTGTVVYLEPLNRYQ. . . . . DHMINTLADARRYIVENDLKHVQIIGDFYHMNIE. EDN
Query Conservation               
      
   

    
      .....                          
       .   
Alig confidence 




































.....

































.


Template Conservation 
  
 




   
  
 
 


 

 




 


    
  


 
 
   
 
  
 

  

  
 
      
 
Template Sequence  VTEEDLVENLRYFLERVIPVCEEENIKXGIHPDDPPWEIFGLPRITKNLADLKRILSLVDSPANGITFCTGSLGADPTND
Template Known Secondary structure 

T



SSSS
BTTB


TTST
STT

TTSTTS
Template Predicted Secondary structure 


































Template SS confidence 















































































   177..180.........190.........200.........210.........220.........230.........240.........250......
 
   190.........200.........210 .........220.........230.........240....... ..250..
Predicted Secondary structure 


..........


















.......
Query SS confidence 




















. . . . . . . . . .




































. . . . . . .




Query Sequence  LAQALHDNRDLLGHVHIADNH. . . . . . . . . . RYQPGSGTLDFHALFEQLRADNYQGYVVYEGRIRAED. . . . . . . PAQAY
Query Conservation             
  


 
  ..........    
 
 

       
   

 
 
  
       .......     
Alig confidence 




















..........




































.......




Template Conservation      
   
 

  





       
 
     
 
 

   

 

   

 
 
  

      
   


   

Template Sequence  LPTXIREIGHRINFVHFRNVKYLGEHRFEETAHPSVAGSLDXAELXQALVDVGYEGVIRPDHGRAIWDEKAXPGYGLYDR
Template Known Secondary structure  GGG





SSS

SSGGGSSS
T

S



B
TT

S
TTSSS
Template Predicted Secondary structure 







































Template SS confidence 















































































   257..260.........270.........280.........290.........300.........310.........320.........330......
 
   253......260
Predicted Secondary structure 
Query SS confidence 







Query Sequence  RDSLAWLR
Query Conservation    
   

Alig confidence 







Template Conservation       

 
Template Sequence  AXGLTYIQ
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 







   337..340....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions