Return to main results Retrieve Phyre Job Id

Job DescriptionP76044
Confidence96.59%DateThu Jan 5 12:17:47 GMT 2012
Rank57Aligned Residues212
% Identity11%Templated1rpxa_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel D-ribulose-5-phosphate 3-epimerase
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.. .......40.........50.........60.........70....
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Query Sequence  MKIGTQNQAFFPENILEKFRYIKEMGFDGFEI. . . . . . DGKLLVNNIEEVKAAIKETGLPVTTACGGYDGWIGDFIEERR
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Template Sequence  IIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVEP. . . . . . . . . .
Template Known Secondary structure 
BGGGS
GGGTT


BSSSSS
B


GGG

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   11........20.........30.........40.........50.........60.........70.........80
 
   75....80.........90.........100.........110.........120.........130.........140.........150....
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Query Sequence  LNGLKQIERILEALAEVGGKGIVVPAAWGMFTFRLPPMTSPRSLDGDRKMVSDSLRVLEQVAARTGTVVYLEPLNRYQDH
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Template Sequence  . . . . . . . DQRVPDFIKAGADIVSVHCEQSSTIH. . . . . . . . . . . . . . . . . . . . . LHRTINQIKSLGAKAGVVLNPGTP. .
Template Known Secondary structure  .......TT
S
STTT
S
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TT

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   81........90.........100...... ...110.........120.........130
 
   155....160.........170.........180.........190.........200.........210.........220.........230....
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Query Sequence  MINTLADARRYIVENDLKHVQIIGDFYHMNIEEDNLAQALHDNRDLLGHVHIADNHRYQPGSGTLDFHALFEQLRADNYQ
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Template Sequence  . . . . LTAIEYVLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICA. . . ERGLNPWIEVDGGVG. PKNAYKVIEAGAN
Template Known Secondary structure  ....GGGGTTTTTT
SSS
TT
SS



TT...T


SS

.TTTT

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   131........140.........150.........160.........170.... .....180......... 190.........200..
 
   235....240.........250.........260
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Query Sequence  GYVVYEGRIRAEDPAQAYRDSLAWLR
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Template Sequence  ALVAGSAVFGAPDYAEAIKGIKTSKR
Template Known Secondary structure  STSS
T


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   203......210.........220........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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