Return to main results Retrieve Phyre Job Id

Job DescriptionP76044
Confidence71.35%DateThu Jan 5 12:17:47 GMT 2012
Rank165Aligned Residues129
% Identity15%Templated1h4pa_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60.........70.........80.........90.....
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  LEKFRYIKEMGFDGFEIDGKLLVNNIEEVKAAIKETGLPVTTACGGYDGWIGDFIEERRLNGLKQIERILEALAEVGGKG
Query Conservation     
      
   


                   

                               
  
  

   
Alig confidence 
















.........................





































Template Conservation 
 
   
   
 
 


.........................

                     

  
  
   

 
Template Sequence  EQDFANIASQGFNLVRI. . . . . . . . . . . . . . . . . . . . . . . . . PIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKV
Template Known Secondary structure  TT

.........................GGGT


TT




SSTT
Template Predicted Secondary structure 



.........................

















Template SS confidence 















































































   116...120.........130.. .......140.........150.........160.........170
 
   96. ..100.........110.........120.........130......... 140.........150.........160........
Predicted Secondary structure  ....



















...












Query SS confidence 

. . . .









































. . .




























Query Sequence  IV. . . . VPAAWGMFTFRLPPMTSPRSLDGDRKMVSDSLRVLEQVAART. . . GTVVYLEPLNRYQDHMINTLADARRYIVE
Query Conservation 
 ....                               
      
   ...

    
                      
Alig confidence 

....









































...




























Template Conservation 




  

 

     
                      

           
 
 

 


              
  
Template Sequence  WVDLHGAAGSQNGFDNSGLRDSYKFLEDSNLAVTINVLNYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAP
Template Known Secondary structure 
TT
SS

GGGSSTT


TTSTTSTTS
S


GGGS
T
Template Predicted Secondary structure 









































Template SS confidence 















































































   171........180.........190.........200.........210.........220.........230.........240.........250
 
   169
Predicted Secondary structure 
Query SS confidence 
Query Sequence  N
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  A
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   251
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions