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Job DescriptionP76044
Confidence98.30%DateThu Jan 5 12:17:47 GMT 2012
Rank43Aligned Residues219
% Identity9%Templated1d8wa_
SCOP infoTIM beta/alpha-barrel Xylose isomerase-like L-rhamnose isomerase
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60... ......70.........80....... ..90...... ...
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Query Sequence  DGKLLVNNIEEVKAAIKETGLPVTTACGGYD. . . . . . . . GWIGDFIEERRLNGLKQIERILEA. . . . LAEVGGKGI. VVP
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Template Sequence  RDQIKPEHFKNWVEWAKANQLGLD. FNPSCFSHPLSADGFTLSHADDSIRQFWIDHCKASRRVSAYFGEQLGTPSVXNIW
Template Known Secondary structure  GGG

GGGGTT
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SSSGGGTTS
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   115....120.........130........ .140.........150.........160.........170.........180.........190...
 
   100.........110.........120.........130... ......140.........150.... .....160.........170......
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Query Sequence  AAWGMFTFRLPPMTSPRSLDGDRKMVSDSLRVLE. QVAARTGTVVYLEPLNRYQDH. . MINTLADARRYIVENDLKHVQI
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Template Sequence  IPDGXK. . . . . . . DITVDRLAPRQRLLAALDEVISEKLNPAHHIDAVESKLFGIGAESYTVGSNEFYXGYATSR. . QTAL
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   194..... 200.........210.........220.........230.........240.........250.........260 ....
 
   177..180.........190........ .200.........210.........220......... 230.........240.........
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Query Sequence  IGDFYHMNIEEDNLAQALHDNR. . DLLGHVHIADNHRYQPGSGTLDFHALFEQLR. . . . . ADNYQGYVVYEGRIRAEDPA
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Template Sequence  CLDAGHFHPTEVISDKISAAXLYVPQL. LLHVSRPVRWDSDHVVLLDDETQAIASEIVRHDLFDRVHIGLDFFDASINRI
Template Known Secondary structure  TTSS
TT

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   265....270.........280.........290. ........300.........310.........320.........330.........340...
 
   250.........260..
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Query Sequence  QAYRDSLAWLRTC
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Template Sequence  AAWVIGTRNXKKA
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   344.....350......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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