Job Description P76044 Confidence 35.16% Date Thu Jan 5 12:17:47 GMT 2012 Rank 398 Aligned Residues 114 % Identity 19% Template c3ucqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:amylosucrase; PDBTitle: crystal structure of amylosucrase from deinococcus geothermalis Resolution 1.97 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.																									.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Query Sequence		I	L	E	K	F	R	Y	I	K	E	M	G	F	D	G	F	E	I	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	L	V	N	N	I	E	E	V	K	A	A	I	K	E	T	G	L	P	V	T	T	A	C	G	G	Y	D	G	.	.	.	.	.	.
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	E	R	L	D	Y	L	E	G	L	G	V	K	Y	L	H	L	M	P	L	L	R	P	R	E	G	E	N	D	G	G	Y	A	V	Q	D	Y	R	A	V	R	P	D	L	G	T	M	D	D	L	S	A	L	A	R	A	L	R	G	R	G	I	S	L	V	L	D	L	V	L	N	H	V	A	R	E	H	A	W
Template Known Secondary structure				T	T							T	T														S	S			G	G	G	T	S									G	G	G																T	T										S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
																																																																				65	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	I	G	D	F	I	E	E	R	R	L	N	G	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	Q	K	A	R	A	G	D	P	K	Y	R	A	Y	F	H	L	F	P	D	R	R	G	P	D	A	F	E	A	T	L	P	E	I	F	P	D	F	A	P	G	N	F	S	W	D	E	E	I	G	E	G	E	G	G	W	V	W	T	T	F	N	S	Y	Q	W	D	L	N	W	A	N	P	D	V	F	L	E	F	V
Template Known Secondary structure							T	T						T	T	B				S	S	S								T	T				S		T	T	T	S		S	S					T	T	S	S	S	S	S							S	S	S	T	T				B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	I	E	R	I	L	E	A	L	A	E	V	G	G	K	G	I	V	V	P	A	A	W	G	M	F	T	F	R	L	P	P	M	T	S	P	R	S	L	D	G	D	R	K	M	V	S	D	S	L	R	V	L
Query Conservation
Alig confidence									.	.	.	.
Template Conservation									.	.	.	.
Template Sequence		D	I	I	L	Y	L	A	.	.	.	.	N	R	G	V	E	V	F	R	L	D	A	I	A	F	I	W	K	R	L	G	T	D	C	Q	N	Q	P	E	V	H	H	L	T	R	A	L	R	A	A	A	R	I	V
Template Known Secondary structure									.	.	.	.	T	T	T							T	T	G	G	G	S				T	T	S		S	S	S
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.					.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions