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Job DescriptionP76044
Confidence28.25%DateThu Jan 5 12:17:47 GMT 2012
Rank446Aligned Residues90
% Identity10%Templatec3rpmA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-n-acetyl-hexosaminidase; PDBTitle: crystal structure of the first gh20 domain of a novel beta-n-acetyl-2 hexosaminidase strh from streptococcus pneumoniae r6
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110.........120.... .....130.....
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Query Sequence  LKQIERILEALAEVGGKGIVVPAAWGMFTFRLPPMTSPRSLDGDRKM. . . . . . . . . . . . . . . . . . . . . . VSDSLRVLEQV
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Template Sequence  PEQLKEIIDKAKHYGYTDLHLLVGNDGLRFXLDDXSITANGKTYASDDVKRAIEKGTNDYYNDPNGNHLTESQXTDLINY
Template Known Secondary structure  T

SSSB

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   201........210.........220.........230.........240.........250.........260.........270.........280
 
   136...140.........150.........160.........170...
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Query Sequence  AARTGTVVYLEPLNRYQDHMINTLADARRYIVENDLKH
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Template Sequence  AKDKGIGLIPT. . . . . . VNSPGHXDAILNAXKELGIQN
Template Known Secondary structure  TT
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TT
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   281........290. ........300.........310..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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