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Job DescriptionP76044
Confidence100.00%DateThu Jan 5 12:17:47 GMT 2012
Rank18Aligned Residues257
% Identity14%Templatec3qxbB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:putative xylose isomerase; PDBTitle: crystal structure of a putative xylose isomerase (yp_426450.1) from2 rhodospirillum rubrum atcc 11170 at 1.90 a resolution
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MKIGTQNQAF. . . FPENILEKFRYIKEMGFDGFEIDG. . . . . . . . . KLLVNNIEEVKAAIKETGLPVTTACGGY. . . . DG
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Template Sequence  XKLGVNLCFAVKRWLEPDRLAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIESTFGGLASYTYN
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GGGGTTTS
STT


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Query Sequence  WIGDFIEERRLNGLKQIERILEALAEVGGKGIVVPAAWGMFTFRLPPMTSPRSLDGDRKMVSDSLRVLEQVAARTGTVVY
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Template Sequence  HFLAPTLELQSLGYQHLKRAIDXTAAXEVPATGXPFGSYSAAD. . . . ALNPARREEIYAIARDXWIELAAYAKRQGLSXL
Template Known Secondary structure  BTT
SSTT
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BB

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   81........90.........100.........110.........120... ......130.........140.........150......
 
   145....150........ .160.........170.........180... ......190.........200......... 210
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Query Sequence  LEPLNRYQDHMINT. . . LADARRYIVENDLKHVQIIGDFYHM. . . . . NIEEDNLAQALHDNRDLLGHVHIADN. . . . . . H
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Template Sequence  YVEPVPLATEFPSSAADAARLXADLDGRTEIPVRLLVDWGHALFEPLFGPEADXDHWXDLCQPWIAAYHIQQTDGQLDRH
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S
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   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   211........220.........230...... ...240....... ..250.........260.
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Query Sequence  RYQPGSGTLDFHALFEQLRADNYQGY. VVYEGRIRAED. . . . PAQAYRDSLAWLRT
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Template Sequence  WSFTQPGVVTPQRLQDFWDKYALTDQTFFAEILYPFEARDEDVLADXIASVKALKA
Template Known Secondary structure  B
TTS
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TT
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   237..240.........250.........260.........270.........280.........290..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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