Job Description P76044 Confidence 98.41% Date Thu Jan 5 12:17:47 GMT 2012 Rank 42 Aligned Residues 220 % Identity 12% Template c3p14C_ PDB info PDB header:isomerase Chain: C: PDB Molecule:l-rhamnose isomerase; PDBTitle: crystal structure of l-rhamnose isomerase with a novel high thermo-2 stability from bacillus halodurans Resolution 2.51 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60									.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.																												.	.	.	.											.
Query SS confidence																														.	.	.	.	.	.	.	.																												.	.	.	.											.
Query Sequence		D	G	K	L	L	V	N	N	I	E	E	V	K	A	A	I	K	E	T	G	L	P	V	T	T	A	C	G	.	.	.	.	.	.	.	.	G	Y	D	G	W	I	G	D	F	I	E	E	R	R	L	N	G	L	K	Q	I	E	R	I	L	E	A	.	.	.	.	L	A	E	V	G	G	K	G	I	V	.	V	P
Query Conservation																														.	.	.	.	.	.	.	.																												.	.	.	.											.
Alig confidence																										.				.	.	.	.	.	.	.	.																												.	.	.	.											.
Template Conservation																										.
Template Sequence		R	D	Q	L	E	P	R	H	F	E	K	W	V	R	W	A	K	R	H	G	L	G	L	D	.	F	N	P	T	L	F	S	H	E	K	A	K	D	G	L	T	L	A	H	P	D	Q	A	I	R	Q	F	W	I	D	H	C	I	A	S	R	K	I	G	E	Y	F	G	K	E	L	E	T	P	C	L	T	N	I	W
Template Known Secondary structure		G	G	G			G	G	G	G											T					.						S	S	S	G	G	G	T	T	S		S	T	T		S	S																										T	S
Template Predicted Secondary structure																										.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		A	A	W	G	M	F	T	F	R	L	P	P	M	T	S	P	R	S	L	D	G	D	R	K	M	V	S	D	S	L	R	V	L	E	.	Q	V	A	A	R	T	G	T	V	V	Y	L	E	P	L	N	R	Y	Q	D	H	M	I	N	T	L	A	D	A	R	R	Y	I	V	E	N	D	L	K	H	V	Q	I	I	G
Query Conservation																																				.
Alig confidence								.	.	.	.	.	.	.																						.
Template Conservation								.	.	.	.	.	.	.
Template Sequence		I	P	D	G	Y	K	.	.	.	.	.	.	.	D	T	P	S	D	R	L	T	P	R	K	R	L	K	E	S	L	D	Q	I	F	A	A	E	I	N	E	A	Y	N	L	D	A	V	E	S	K	L	F	G	I	G	S	E	S	Y	V	V	G	S	H	E	F	Y	L	S	Y	A	L	K	N	D	K	L	C	L	L
Template Known Secondary structure							S	.	.	.	.	.	.	.	S			S		S															T		S				T	T	T									S		B	T	T	B		S			S	S												T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.						.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																						.	.										.	.	.	.	.																														.
Query SS confidence																						.	.										.	.	.	.	.																														.
Query Sequence		D	F	Y	H	M	N	I	E	E	D	N	L	A	Q	A	L	H	D	N	R	.	.	D	L	L	G	H	V	H	I	A	.	.	.	.	.	D	N	H	R	Y	Q	P	G	S	G	T	L	D	F	H	A	L	F	E	Q	L	R	A	D	N	Y	Q	G	Y	.	V	V	Y	E	G	R	I	R	A	E	D	P	A	Q
Query Conservation																						.	.										.	.	.	.	.																														.
Alig confidence																						.	.				.						.	.	.	.	.													.																	.
Template Conservation																											.																							.
Template Sequence		D	T	G	H	Y	H	P	T	E	T	V	S	N	K	I	S	A	M	L	L	F	H	D	K	L	.	A	L	H	V	S	R	P	V	R	W	D	S	D	H	V	V	T	F	D	D	E	L	.	R	E	I	A	L	E	I	V	R	N	D	A	L	D	R	V	L	I	G	L	D	F	F	D	A	S	I	N	R	I	A
Template Known Secondary structure			T	T	S	S		T	T			S												S			.						B		S	S	S				B				S					.										T	T		T	T	T										T	T	S
Template Predicted Secondary structure																											.																							.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	R	D	S	L	A	W	L	R	T	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	W	T	I	G	T	R	N	V	I	K	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions