Job Description P76044 Confidence 86.11% Date Thu Jan 5 12:17:47 GMT 2012 Rank 109 Aligned Residues 213 % Identity 14% Template c3noyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: crystal structure of ispg (gcpe) Resolution 2.70 Å

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		3	.	.	.	.	.	.	10	.	.					.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		I	G	T	Q	N	Q	A	F	F	P	.	.	.	.	E	N	I	L	E	K	F	R	Y	I	K	E	M	G	F	D	G	F	E	I	D	G	K	L	L	V	N	N	I	E	E	V	K	A	A	I	K	E	T	G	L	P	V	T	T	A	C	G	G	Y	D	G	W	I	G	D	F	I	E	E	R	R	L	N	G	L
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																					.																						.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.																						.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	V	Q	S	M	T	S	T	K	T	H	D	V	E	A	T	L	N	Q	I	K	R	L	Y	E	A	G	C	E	I	V	R	V	.	A	V	P	H	K	E	D	V	E	A	L	E	E	I	V	K	K	S	P	M	P	.	.	.	V	I	A	D	I	H	F	A	P	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S		T	T															T	T							.				S															S	S		.	.	.							S			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.																						.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.
Predicted Secondary structure																																																																						.				.	.	.	.	.	.	.	.
Query SS confidence																																																																						.				.	.	.	.	.	.	.	.
Query Sequence		K	Q	I	E	R	I	L	E	A	L	A	E	V	G	G	K	G	I	V	V	P	A	A	W	G	M	F	T	F	R	L	P	P	M	T	S	P	R	S	L	D	G	D	R	K	M	V	S	D	S	L	R	V	L	E	Q	V	A	A	R	T	G	T	V	V	Y	L	E	.	P	L	N	.	.	.	.	.	.	.	.
Query Conservation																																																																						.				.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.				.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	S	Y	A	F	L	S	M	E	K	G	V	H	G	I	R	I	N	P	G	N	I	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	I	V	R	E	I	V	E	E	A	K	R	R	G	V	A	V	R	I	G	V	N	S	G	S	L	E	K	D	L	L	E
Template Known Secondary structure		.	.	.	.									T	T		S										S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T									G	G	G
Template Predicted Secondary structure		.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
						150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure		.	.	.	.																																																							.
Query SS confidence		.	.	.	.																																																							.
Query Sequence		.	.	.	.	R	Y	Q	D	H	M	I	N	T	L	A	D	A	R	R	Y	I	V	E	N	D	L	K	H	V	Q	I	I	G	D	F	Y	H	M	N	I	E	E	D	N	L	A	Q	A	L	H	D	N	R	D	L	L	G	H	.	V	H	I	A	D	N	H	R	Y	Q	P	G	S	G	T	L	D	F	H	A	L
Query Conservation		.	.	.	.																																																							.
Alig confidence		.	.	.	.																																						.	.	.	.														.
Template Conservation																																											.	.	.	.
Template Sequence		K	Y	G	Y	P	S	A	E	A	L	A	E	S	A	L	R	W	S	E	K	F	E	K	W	G	F	T	N	Y	K	V	S	I	K	G	S	D	V	L	Q	N	.	.	.	.	V	R	A	N	L	I	F	A	E	R	T	D	V	P	L	H	I	G	I	T	E	A	G	M	G	T	K	G	I	I	K	S	S	V	G
Template Known Secondary structure				S	S																				T	T											S	S					.	.	.	.																				S	S			S
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	Q	L	R	A	D	N	Y	Q	G	Y	V	V	Y	E	G	R	I	R	A	E	D	P	A	Q	A	Y	R	D	S	L	A	W	L	R	T	C
Query Conservation
Alig confidence																	.	.	.
Template Conservation																	.	.	.
Template Sequence		I	G	I	L	L	Y	M	G	I	G	D	T	V	R	V	.	.	.	S	L	T	D	D	P	V	V	E	V	E	T	A	Y	E	I	L	K	S	L
Template Known Secondary structure								T	T			S					.	.	.			S	S																T
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions