Job Description P76044 Confidence 100.00% Date Thu Jan 5 12:17:47 GMT 2012 Rank 17 Aligned Residues 243 % Identity 22% Template c3ngfA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ap endonuclease, family 2; PDBTitle: crystal structure of ap endonuclease, family 2 from brucella2 melitensis Resolution 1.80 Å

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		2	.	.	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure							.																																																										.	.	.	.	.
Query SS confidence							.																																																										.	.	.	.	.
Query Sequence		K	I	G	T	Q	.	N	Q	A	F	F	P	E	N	I	L	E	K	F	R	Y	I	K	E	M	G	F	D	G	F	E	I	D	G	K	L	L	V	N	N	I	E	E	V	K	A	A	I	K	E	T	G	L	P	V	T	T	A	C	G	G	Y	D	.	.	.	.	.	G	W	I	G	D	F	I	E	E	R	R	L
Query Conservation							.																																																										.	.	.	.	.
Alig confidence							.																													.																													.	.	.	.	.
Template Conservation																																				.
Template Sequence		R	F	A	A	N	L	S	T	M	F	N	E	V	P	F	L	E	R	F	R	L	A	A	E	A	G	F	G	G	V	E	F	L	F	.	P	Y	D	F	D	A	D	V	I	A	R	E	L	K	Q	H	N	L	T	Q	V	L	F	N	M	P	P	G	D	W	A	A	G	E	R	G	M	A	A	I	S	G	R	E	Q
Template Known Secondary structure							T	T	T	S		T	T	S												T	T		S					S		.		T	T	S												T	T											S		T	T	T	T			B		T	T		T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		N	G	L	K	Q	I	E	R	I	L	E	A	L	A	E	V	G	G	K	G	I	V	V	P	A	A	W	G	M	F	T	F	R	L	P	P	M	T	S	P	R	S	L	D	G	D	R	K	M	V	S	D	S	L	R	V	L	E	Q	V	A	A	R	T	G	T	V	V	Y	L	E	P	L	N	R	.	.	Y	Q	D
Query Conservation																																																																													.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.																																								.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.
Template Sequence		E	F	R	D	N	V	D	I	A	L	H	Y	A	L	A	L	D	C	R	T	L	H	A	M	S	G	.	.	.	.	.	.	.	.	.	.	I	T	E	G	L	D	R	K	A	C	E	E	T	F	I	E	N	F	R	Y	A	A	D	K	L	A	P	H	G	I	T	V	L	V	E	P	L	N	T	R	N	M	P	G
Template Known Secondary structure																	T	T								B		.	.	.	.	.	.	.	.	.	.	B		T	T	S																					G	G	G	T										T	T	T	S	T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.											.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		H	M	I	N	T	L	A	D	A	R	R	Y	I	V	E	N	D	L	K	H	V	Q	I	I	G	D	F	Y	H	M	N	I	E	E	D	N	L	A	Q	A	L	H	D	N	R	D	L	L	G	H	V	H	I	A	D	.	N	H	R	Y	Q	P	G	S	G	T	L	D	F	H	A	L	F	E	Q	L	R	A	D	N
Query Conservation																																																									.
Alig confidence																																																									.
Template Conservation
Template Sequence		Y	F	I	V	H	Q	L	E	A	V	G	L	V	K	R	V	N	R	P	N	V	A	V	Q	L	D	L	Y	H	A	Q	I	M	D	G	D	L	T	R	L	I	E	K	M	N	G	A	F	S	H	V	Q	I	A	S	V	P	D	R	H	E	P	D	E	G	E	L	N	Y	P	Y	L	F	S	V	L	E	S	V	G
Template Known Secondary structure		B	S																	T	T														T										T	T	T	S									T	T	T				T	T	S	S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	G	Y	V	V	Y	E	G	R	I	R	A	E	D	P	A	Q	A	Y	R	D	S	L	A	W	L	R
Query Conservation
Alig confidence											.	.	.	.	.
Template Conservation											.	.	.	.	.
Template Sequence		Y	R	G	W	V	G	C	E	Y	.	.	.	.	.	N	P	R	G	K	T	E	S	G	L	A	W	F	A
Template Known Secondary structure				S							.	.	.	.	.			S	S	S	G	G	G	G	G	G	G	G	G
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240						.	.	.	.	.	.	.	.	.	250	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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