Return to main results Retrieve Phyre Job Id

Job DescriptionP76044
Confidence34.76%DateThu Jan 5 12:17:47 GMT 2012
Rank399Aligned Residues95
% Identity15%Templatec3mkcA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:racemase; PDBTitle: crystal structure of a putative racemase
Resolution1.77 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60.........70.........80.........90.....
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  LEKFRYIKEMGFDGFEIDGKLLVNNIEEVKAAIKETGLPVTTACGGYDGWIGDFIEERRLNGLKQIERILEALAEVGGKG
Query Conservation     
      
   


                   

                               
  
  

   
Alig confidence 















..























.................




















Template Conservation        
    
  

..

    
      
      


 .................


         

     
 
Template Sequence  ARLLNSIEDLELYFAE. . ATLQHDDLSGHAKLVENTRSRICG. . . . . . . . . . . . . . . . . AEXSTTRFEAEEWITKGKVHL
Template Known Secondary structure  TGGG

S..S
S
TT

SS
B.................
TT

TT

S
Template Predicted Secondary structure 



..









.................










Template SS confidence 















































































   223......230........ .240.........250.........260.. .......270.........280...
 
   96...100.........110.........120.........130.........140.........
Predicted Secondary structure 























Query SS confidence 





















































Query Sequence  IVVPAAWGMFTFRLPPMTSPRSLDGDRKMVSDSLRVLEQVAARTGTVVYLEPLN
Query Conservation 
                                
      
   

    
   
Alig confidence 









....................























Template Conservation 
  
    

....................

    

  
   

    
   
Template Sequence  LQSDYNRCGG. . . . . . . . . . . . . . . . . . . . LTELRRITEXATANNVQVXPHNWK
Template Known Secondary structure 


TTTTT....................TT





S
Template Predicted Secondary structure 






....................






Template SS confidence 





















































   284.....290... ......300.........310.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions