Job Description P76044 Confidence 100.00% Date Thu Jan 5 12:17:47 GMT 2012 Rank 11 Aligned Residues 248 % Identity 18% Template c3l23A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of sugar phosphate isomerase/epimerase2 (yp_001303399.1) from parabacteroides distasonis atcc 8503 at 1.70 a3 resolution Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10					.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure												.	.	.	.																														.	.	.	.																																.	.
Query SS confidence												.	.	.	.																														.	.	.	.																																.	.
Query Sequence		M	K	I	G	T	Q	N	Q	A	F	.	.	.	.	F	P	E	N	I	L	E	K	F	R	Y	I	K	E	M	G	F	D	G	F	E	I	D	G	K	L	L	V	N	.	.	.	.	N	I	E	E	V	K	A	A	I	K	E	T	G	L	P	V	T	T	A	C	G	G	Y	D	G	W	I	G	D	F	I	.	.
Query Conservation												.	.	.	.																														.	.	.	.																																.	.
Alig confidence												.	.	.	.																														.	.	.	.																																.	.
Template Conservation
Template Sequence		K	E	I	G	L	Q	I	Y	S	L	S	Q	E	L	Y	K	G	D	V	A	A	N	L	R	K	V	K	D	X	G	Y	S	K	L	E	L	A	G	Y	G	K	G	A	I	G	G	V	P	X	X	D	F	K	K	X	A	E	D	A	G	L	K	I	I	S	S	H	V	N	P	V	D	T	S	I	S	D	P	F	K
Template Known Secondary structure								G	G	G	G	G	G	G	G	G	S	S												T	T											T	T			T	T													T	T											B		T	T		S	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
									71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	E	E	R	R	L	N	G	L	K	Q	I	E	R	I	L	E	A	L	A	E	V	G	G	K	G	I	V	V	P	A	A	W	G	M	F	T	F	R	L	P	P	M	T	S	P	R	S	L	D	G	D	R	K	M	V	S	D	S	L	R	V	L	E	Q	V	A	A	R	T	G	T	V	V
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	X	I	F	K	Y	S	K	E	V	T	P	K	I	X	E	Y	W	K	A	T	A	A	D	H	A	K	L	G	C	K	Y	L	I	Q	P	X	X	P	T	I	T	.	.	.	.	.	.	.	.	.	.	.	.	T	H	D	E	A	K	L	V	C	D	I	F	N	Q	A	S	D	V	I	K	A	E	G	I	A	T
Template Known Secondary structure		T	B			S			T	T	T																		T	T		S						S						.	.	.	.	.	.	.	.	.	.	.	.	S																					T	T		T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.													.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		144	.	.	.	.	.	150											.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	L	E	P	L	N	R	.	.	.	.	.	.	.	.	.	.	Y	Q	D	H	M	I	N	T	L	A	D	A	R	R	Y	I	V	E	N	D	L	K	H	V	Q	I	I	G	D	F	Y	H	M	N	I	E	E	D	N	L	A	Q	A	L	H	D	N	R	D	L	L	G	H	V	H	I	A	D	N	H	R	Y	Q
Query Conservation									.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.																																																												.
Template Conservation																																																																														.
Template Sequence		G	F	G	Y	H	N	H	N	X	E	F	N	R	V	A	T	K	E	Q	Q	F	X	K	V	G	D	Q	I	Y	D	L	X	L	K	D	T	D	P	S	K	V	Y	F	E	X	D	V	Y	W	T	V	X	G	Q	N	D	P	V	E	Y	X	Q	K	H	P	D	R	I	K	V	L	H	I	K	D	R	.	A	V	F
Template Known Secondary structure									S	G	G	G	S					T	T	T						S											S		T	T	T													T	T											T	T	T									S	.	S	S	T
Template Predicted Secondary structure																																																																														.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		P	G	S	G	T	L	D	F	H	A	L	F	E	Q	L	R	A	D	N	Y	Q	G	Y	V	V	Y	E	G	R	I	.	.	R	A	E	D	P	A	Q	A	Y	R	D	S	L	A	W	L	R	T	C
Query Conservation																																.	.
Alig confidence																										.						.	.
Template Conservation																										.
Template Sequence		G	Q	S	G	X	X	N	F	E	X	I	F	K	Q	X	Y	A	N	G	I	K	D	Y	F	.	V	E	L	E	Q	X	P	D	G	R	T	Q	F	A	G	V	K	D	C	A	D	Y	L	I	K	A
Template Known Secondary structure		T	S	S	S															T						.							T	T	S
Template Predicted Secondary structure																										.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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