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Job DescriptionP76044
Confidence89.46%DateThu Jan 5 12:17:47 GMT 2012
Rank92Aligned Residues195
% Identity15%Templatec3dxiB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:putative aldolase; PDBTitle: crystal structure of the n-terminal domain of a putative2 aldolase (bvu_2661) from bacteroides vulgatus
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40 .........50.........60.........70......
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Query Sequence  NQAFFPENILEKFRYIKEMGFDGFEIDGKLLVNN. . . . . . . . . . IEEVKAAIKETGLPVTTACGGYDGWIGDFIEERRLN
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Template Sequence  NWDFNSKIVDAYILAXNELPIDYLEVGYRNKPSKEYXGKFGYTPVSVLKHLRNISTKKIAIXLNEKNTTPED. . . . . . . .
Template Known Secondary structure  TT


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SGGG

GGG........
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   16...20.........30.........40.........50.........60.........70.........80.......
 
   77..80.........90.........100.........110.........120.........130.........140.........150......
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Query Sequence  GLKQIERILEALAEVGGKGIVVPAAWGMFTFRLPPMTSPRSLDGDRKMVSDSLRVLEQVAARTGTVVYLEPLNRYQDHMI
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Template Sequence  . . . . . LNHLLLPIIGLVDXIRIAID. . . . . . . . . . . . . . . . . . . . . PQNIDRAIVLAKAIKTXGFEVGFNVXYXSKWAEX
Template Known Secondary structure  .....GGGTTT
S
.....................GGGTT


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   88.90.........100....... ..110.........120.........130.........140.
 
   157..160.........170.........180........ .190.........200.........210....
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Query Sequence  NTLADARRYIVENDLKHVQIIGDFYHMNIEED. NLAQALHDNRDLLGHVHIADNHRYQP. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  NGFLSKLKAIDK. IADLFCXVDSFGGITPKEVKNLLKEVRKYTHVPVGFHGHDNLQLGLINSITAIDDGIDFIDATITGX
Template Known Secondary structure  TTTGGGGGGGTT.T
S
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S

B
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TT
SBGGG
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   142.......150... ......160.........170.........180.........190.........200.........210.........220
 
   215....220.........230......
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Query Sequence  . . GSGTLDFHALFEQLRADNYQGY
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Template Sequence  GRGAGNLKXELLLTYLNKHHGLNV
Template Known Secondary structure  SSTT
B
BS



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   221........230.........240....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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