Job Description P76044 Confidence 100.00% Date Thu Jan 5 12:17:47 GMT 2012 Rank 9 Aligned Residues 250 % Identity 21% Template c3cnyA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:inositol catabolism protein iole; PDBTitle: crystal structure of a putative inositol catabolism protein iole2 (iole, lp_3607) from lactobacillus plantarum wcfs1 at 1.85 a3 resolution Resolution 1.85 Å

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		1	.	.	.	.	.	.	.	.	10	.										.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.
Query Sequence		M	K	I	G	T	Q	N	Q	A	F	F	.	.	.	.	.	.	.	.	.	P	E	N	I	L	E	K	F	R	Y	I	K	E	M	G	F	D	G	F	E	I	D	G	K	L	L	V	N	N	I	E	E	V	K	A	A	I	K	E	T	G	L	P	V	T	T	A	C	G	G	Y	D	G	W	I	G	D	F	I	E
Query Conservation													.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.																											.	.																							.	.	.	.	.
Template Conservation																																																.	.																							.	.	.	.	.
Template Sequence		I	K	W	G	I	A	P	I	G	W	R	N	D	D	I	P	S	I	G	K	D	N	N	L	Q	Q	L	L	S	D	I	V	V	A	G	F	Q	G	T	E	V	G	G	F	F	P	.	.	G	P	E	K	L	N	Y	E	L	K	L	R	N	L	E	I	A	G	Q	W	F	S	.	.	.	.	.	S	Y	I	I	R
Template Known Secondary structure								G	G	G	T			S	S	S	T	T	T	T	T	T														T								T	T			.	.												T	T										.	.	.	.	.
Template Predicted Secondary structure																																																.	.																							.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.						.	.	.	80	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		E	R	R	L	N	G	L	K	Q	I	E	R	I	L	E	A	L	A	E	V	G	G	K	G	I	V	V	P	A	A	W	G	M	.	.	.	F	T	F	R	L	P	P	M	T	S	P	R	S	L	D	G	D	R	K	M	V	S	D	S	L	R	V	L	E	Q	V	A	A	R	T	G	T	V	V	Y	L	E	P	L
Query Conservation																																			.	.	.
Alig confidence																																			.	.	.
Template Conservation
Template Sequence		D	G	I	E	K	A	S	E	A	F	E	K	H	C	Q	Y	L	K	A	I	N	A	P	V	A	V	V	S	E	Q	T	Y	T	I	Q	R	S	D	T	A	N	I	F	K	D	K	P	Y	F	T	D	K	E	W	D	E	V	C	K	G	L	N	H	Y	G	E	I	A	A	K	Y	G	L	K	V	A	Y	H	H	H
Template Known Secondary structure																					T	T										T	T			T	T		S	S			T	T	T																											T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	R	Y	Q	D	H	M	I	N	T	L	A	D	A	R	R	Y	I	V	E	N	D	L	K	H	V	Q	I	I	G	D	F	Y	H	M	N	I	E	E	D	N	L	A	Q	A	L	H	D	N	R	D	L	L	G	H	V	H	I	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	X	G	T	G	I	Q	T	K	E	E	T	D	R	L	X	A	N	T	D	P	K	L	V	G	L	L	Y	D	T	G	H	I	A	V	S	D	G	D	Y	X	A	L	L	N	A	H	I	D	R	V	V	H	V	H	F	K	D	V	R	R	S	K	E	E	E	C	R	A	K	G	L	T	F	Q	G	S	F
Template Known Secondary structure		.	.	.	T	T	S	S	S		S										T	S		T	T	T															S		S								G	G	G																					T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
				209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure		.	.																																		.	.
Query SS confidence		.	.																																		.	.
Query Sequence		.	.	N	H	R	Y	Q	P	G	S	G	T	L	D	F	H	A	L	F	E	Q	L	R	A	D	N	Y	Q	G	Y	V	V	Y	E	G	.	.	R	I	R	A	E	D	P	A	Q	A	Y	R	D	S	L	A	W	L	R
Query Conservation		.	.																																		.	.
Alig confidence		.	.																																		.	.
Template Conservation
Template Sequence		L	N	G	X	F	T	V	P	G	D	G	D	L	D	F	K	P	V	Y	D	K	L	I	A	N	N	Y	K	G	W	I	V	V	E	A	E	Q	D	P	S	K	A	N	P	L	E	X	A	Q	I	A	H	R	Y	I	K
Template Known Secondary structure			T	T					T	T	T	S	S													T	T													T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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