Return to main results Retrieve Phyre Job Id

Job DescriptionP76044
Confidence68.97%DateThu Jan 5 12:17:47 GMT 2012
Rank179Aligned Residues103
% Identity16%Templatec3bxwB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:chitinase domain-containing protein 1; PDBTitle: crystal structure of stabilin-1 interacting chitinase-like2 protein, si-clp
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30....... ..40.........50.........60.........70.........80......
Predicted Secondary structure 







........













Query SS confidence 






















. . . . . . . .
















































Query Sequence  ILEKFRYIKEMGFDGFEIDGKLL. . . . . . . . VNNIEEVKAAIKETGLPVTTACGGYDGWIGDFIEERRLNGLKQIERILE
Query Conservation 
   
      
   


     ........              

                               
 
Alig confidence 






















........















































.
Template Conservation 
 


     
 






 
     
      

 


  
          
                 
   
   
.
Template Sequence  SKTVVQVAKNQHFDGFVVEVWNQLLSKRVGLIHMLTHLAEALHQARLLALLVIPPAITPGTDQLGMFTHKEFEQLAPVL.
Template Known Secondary structure  T


GGG



TT


SB
TTTSSB
SS
TTT
.
Template Predicted Secondary structure 





























.
Template SS confidence 















































































   152.......160.........170.........180.........190.........200.........210.........220.........230
 
   87..90.........100.........110.........120.....
Predicted Secondary structure 






















Query SS confidence 






































Query Sequence  ALAEVGGKGIVVPAAWGMFTFRLPPMTSPRSLDGDRKMV
Query Conservation   
  

   
                             
Alig confidence  .......































Template Conservation  .......
 
 




       
  


  
   
   
Template Sequence  . . . . . . . DGFSLMTYDYSTAHQPGPNAPLSWVRACVQVL
Template Known Secondary structure  .......S





BTTB


SS
Template Predicted Secondary structure  .......













Template SS confidence 






































   232.......240.........250.........260...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions