Job Description P76044 Confidence 99.94% Date Thu Jan 5 12:17:47 GMT 2012 Rank 34 Aligned Residues 235 % Identity 15% Template c3bdkB_ PDB info PDB header:lyase Chain: B: PDB Molecule:d-mannonate dehydratase; PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.								.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																						.									.	.	.	.	.	.	.
Query SS confidence																						.									.	.	.	.	.	.	.
Query Sequence		Q	N	Q	A	F	F	P	E	N	I	L	E	K	F	R	Y	I	K	E	M	.	G	F	D	G	F	E	I	D	.	.	.	.	.	.	.	G	K	L	L	V	N	N	I	E	E	V	K	A	A	I	K	E	T	G	L	P	V	T	T	A	C	G	G	Y	D	G	W	I	G	D	F	I	E	E	R	R	L	N	G
Query Conservation																						.									.	.	.	.	.	.	.
Alig confidence																						.									.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	S	F	R	W	Y	G	K	K	D	P	V	T	L	E	E	I	K	A	I	P	G	M	Q	G	I	V	T	A	V	Y	D	V	P	V	G	Q	A	W	P	L	E	N	I	L	E	L	K	K	M	V	E	E	A	G	L	E	I	T	V	I	E	S	I	P	V	H	E	D	I	K	Q	G	K	P	N	R	D	A	L
Template Known Secondary structure									T	T		S	S							T	S	T	T										S	S		T	T	S																	T	T																		T		T	T
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																														.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	Q	I	E	R	I	L	E	A	L	A	E	V	G	G	K	G	I	V	V	P	A	A	W	G	M	F	T	F	R	L	P	P	M	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	R	S	L	D	G	D	R	K	M	V	S	D	S
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	N	Y	K	T	S	I	R	N	V	G	A	A	G	I	P	V	V	C	Y	N	F	M	P	V	F	D	W	T	R	S	D	L	H	H	P	L	P	D	G	S	T	S	L	A	F	L	K	S	D	L	A	G	V	D	P	V	A	I	I	E	N	Y	R	Q	N	I	S	E	E	D	L	W	A	N	L	E	Y	F
Template Known Secondary structure																T										S	S		S				S	B	S	S				T	T	S		B						S	S	S	S		S	S												T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.						.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.			.	200
Predicted Secondary structure																									.	.	.	.	.																																						.											.	.
Query SS confidence																									.	.	.	.	.																																						.											.	.
Query Sequence		L	R	V	L	E	Q	V	A	A	R	T	G	T	V	V	Y	L	E	P	L	N	R	Y	.	.	.	.	.	Q	D	H	M	I	N	T	L	A	D	A	R	R	Y	I	V	E	N	D	L	K	H	V	Q	I	I	G	D	F	Y	H	M	N	I	E	E	D	.	N	L	A	Q	A	L	H	D	N	R	.	.	D	L
Query Conservation																									.	.	.	.	.																																						.											.	.
Alig confidence																									.	.	.	.	.																																						.											.	.
Template Conservation
Template Sequence		I	K	A	I	L	P	T	A	E	E	A	G	V	K	M	A	I	H	P	D	D	P	P	Y	G	I	F	G	L	P	R	I	I	T	G	Q	E	A	V	E	R	F	L	N	L	Y	D	S	E	H	N	G	I	T	M	C	V	G	S	Y	A	S	D	P	K	N	D	V	L	A	M	T	E	Y	A	L	K	R	N	R
Template Known Secondary structure													T									S	S	S	S			T	T							S									T	T	S		S	T	T											T	T	S	T	T														T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		201	.	.	.	.	.	.	.	.	210	.	.										.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure														.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.
Query Sequence		L	G	H	V	H	I	A	D	N	H	R	Y	.	.	.	.	.	.	.	.	.	Q	P	G	S	G	T	L	D	F	H	A	L	F	E	Q	L	R	A	D	N	Y	Q	G	Y	V	V	Y	E
Query Conservation														.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	N	F	M	H	T	R	N	V	T	A	G	A	W	G	F	Q	E	T	A	H	L	S	Q	A	G	D	I	D	M	N	A	V	V	K	L	L	V	D	Y	D	W	Q	G	S	L	R	P	D
Template Known Secondary structure														T	T							S	S	G	G	G	S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions