Job Description P76044 Confidence 100.00% Date Thu Jan 5 12:17:47 GMT 2012 Rank 4 Aligned Residues 249 % Identity 24% Template c2zvrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:uncharacterized protein tm_0416; PDBTitle: crystal structure of a d-tagatose 3-epimerase-related2 protein from thermotoga maritima Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																									.																							.	.	.	.	.
Query SS confidence																																									.																							.	.	.	.	.
Query Sequence		M	K	I	G	T	Q	N	Q	A	F	F	P	E	N	I	L	E	K	F	R	Y	I	K	E	M	G	F	D	G	F	E	I	D	G	K	L	L	V	N	.	N	I	E	E	V	K	A	A	I	K	E	T	G	L	P	V	T	T	A	C	G	G	.	.	.	.	.	Y	D	G	W	I	G	D	F	I	E	E	R	R
Query Conservation																																									.																							.	.	.	.	.
Alig confidence														.																											.																							.	.	.	.	.
Template Conservation														.
Template Sequence		L	S	L	V	I	S	T	S	D	F	K	G	.	D	L	R	K	G	M	E	L	A	K	R	V	G	Y	Q	A	V	E	I	A	V	R	D	P	S	I	V	D	W	N	E	V	K	I	L	S	E	E	L	N	L	P	I	C	A	I	G	T	G	Q	A	Y	L	A	D	G	L	S	L	T	H	P	N	D	E	I	R
Template Known Secondary structure														.													T		S							S		G	G	G	S													T									T					T	T				T	T		S	S
Template Predicted Secondary structure														.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	G	L	K	Q	I	E	R	I	L	E	A	L	A	E	V	G	G	K	G	I	V	V	P	A	A	W	G	M	F	T	F	R	L	P	P	M	T	S	P	R	S	L	D	G	D	R	K	M	V	S	D	S	L	R	V	L	E	Q	V	A	A	R	T	G	T	V	V	Y	L	E	P	L	N	R	Y	Q	D	H
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.																																							.	.
Template Conservation																													.	.	.	.	.	.	.	.	.																																							.	.
Template Sequence		K	K	A	I	E	R	V	V	K	H	T	E	V	A	G	M	F	G	A	L	V	I	I	G	L	V	R	.	.	.	.	.	.	.	.	.	G	R	R	E	G	R	S	Y	E	E	T	E	E	L	F	I	E	S	M	K	R	L	L	E	L	T	E	H	A	K	F	V	I	E	P	L	N	R	.	.	Y	E	T	D
Template Known Secondary structure																			T						S	G	G	G	.	.	.	.	.	.	.	.	.				T	T	S																					S	S										T	.	.	T	T		S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																																							.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.										.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	N	T	L	A	D	A	R	R	Y	I	V	E	N	D	L	K	H	V	Q	I	I	G	D	F	Y	H	M	N	I	E	E	D	N	L	A	Q	A	L	H	D	N	R	D	L	L	G	H	V	H	I	A	D	N	H	R	Y	Q	P	G	S	G	T	L	D	F	H	A	L	F	E	Q	L	R	A	D	N	Y	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	N	T	I	D	D	A	L	R	I	L	R	K	I	N	S	N	R	V	G	I	L	A	D	T	F	H	M	N	I	E	E	V	N	I	P	E	S	L	K	R	A	G	E	K	L	Y	H	F	H	V	A	D	S	N	R	W	A	P	G	C	G	H	F	D	F	R	S	V	F	N	T	L	K	E	I	G	Y	N
Template Known Secondary structure		S			S														T	T															S	S									G	G	G									T	T	S	S	S	T	T	S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	V	V	Y	E	G	R	I	R	A	E	D	P	A	Q	A	Y	R	D	S	L	A	W	L	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Y	V	S	V	E	C	L	P	L	P	G	G	M	E	E	A	A	E	I	A	F	K	T	L	K	E
Template Known Secondary structure		S								S	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions