Job Description P76044 Confidence 43.49% Date Thu Jan 5 12:17:47 GMT 2012 Rank 338 Aligned Residues 127 % Identity 9% Template c2yxgD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihyrodipicolinate synthase (dapa) Resolution 2.20 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.								.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.
Query Sequence		I	L	E	K	F	R	Y	I	K	E	M	G	F	D	G	F	E	I	D	G	K	L	.	.	.	.	.	.	.	L	V	N	N	I	E	E	V	K	A	A	I	K	E	T	G	L	P	V	T	T	A	C	G	G	Y	D	G	W	I	G	D	F	I	E	E	R	R	L	N	G	L	K	Q	I	E	R	I	L	E	A
Query Conservation																								.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	E	N	I	N	F	L	I	E	N	G	V	S	G	I	V	A	V	G	T	T	G	E	S	P	T	L	S	H	E	E	H	K	K	V	I	E	K	V	V	D	V	V	N	G	R	V	Q	V	I	A	G	A	G	S	N	C	T	.	.	.	.	.	.	.	.	.	.	.	.	E	E	A	I	E	L	S	V	F
Template Known Secondary structure												T	T		S					S	S	T	T	T	T	G	G	G	S																	T	T	S	S									S	S		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.													.	.	.	.	.	.	.	.	90
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	V	G	G	K	G	I	V	V	P	A	A	W	G	M	F	T	F	R	L	P	P	M	T	S	P	R	S	L	D	G	D	R	K	M	V	S	D	S	L	R	V	L	E	Q	V	A	A	R	T	G	T	V	V	Y	L	E	P	L	N	R	Y	Q	D	H	M	I	N	T	L	A	D	A	R	R	Y	I	V
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.																			.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.																			.
Template Sequence		A	E	D	V	G	A	D	A	V	L	S	I	T	P	Y	Y	N	K	P	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	L	R	K	H	F	G	K	V	A	E	S	I	.	.	.	N	L	P	I	V	L	Y	N	V	P	S	R	T	A	V	N	L	E	.	P	K	T	V	K	L	L	A	E
Template Known Secondary structure						T		S									S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	S	S												S					.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.																			.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.															.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.
		168	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Y	S	N
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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