Job Description P76044 Confidence 100.00% Date Thu Jan 5 12:17:47 GMT 2012 Rank 23 Aligned Residues 246 % Identity 15% Template c2x7vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable endonuclease 4; PDBTitle: crystal structure of thermotoga maritima endonuclease iv in2 the presence of zinc Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.										.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.																								.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.																								.	.
Query Sequence		M	K	I	G	T	Q	N	Q	A	F	F	P	E	N	I	L	E	K	F	R	Y	I	K	E	M	G	F	D	G	F	E	I	.	.	.	.	.	.	.	.	.	D	G	K	L	L	V	N	N	I	E	E	V	K	A	A	I	K	E	T	G	L	P	V	.	.	T	T	A	C	G	G	Y	D	G	W	I	G	D	F
Query Conservation																																		.	.	.	.	.	.	.	.	.																								.	.
Alig confidence													.	.																				.	.	.	.	.	.	.	.	.																								.	.
Template Conservation													.	.
Template Sequence		I	K	I	G	A	H	M	P	I	S	K	.	.	G	F	D	R	V	P	Q	D	T	V	N	I	G	G	N	S	F	Q	I	F	P	H	N	A	R	S	W	S	A	K	L	P	S	D	E	A	A	T	K	F	K	R	E	M	K	K	H	G	I	D	W	E	N	A	F	C	H	S	G	Y	L	I	N	L	A	S	P
Template Known Secondary structure											T	T	.	.		G	G	G								T	T		S						S				S	S	S																					T			G	G	G							T	T			T	T		S
Template Predicted Secondary structure													.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	E	R	R	L	N	G	L	K	Q	I	E	R	I	L	E	A	L	A	E	V	G	G	K	G	I	V	V	P	A	A	W	G	M	F	T	F	R	L	P	P	M	T	S	P	R	S	L	D	G	D	R	K	M	V	S	D	S	L	R	V	L	E	Q	V	A	A	R	T	G	T	V	V	Y	L	E	P	L	N
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.																							.	.
Template Sequence		K	D	D	I	W	Q	K	S	V	E	L	L	K	K	E	V	E	I	C	R	K	L	G	I	R	Y	L	N	I	H	P	G	.	.	.	.	.	.	.	.	.	.	S	H	L	G	T	G	E	E	E	G	I	D	R	I	V	R	G	L	N	E	V	L	.	.	N	N	T	E	G	V	V	I	L	L	E	N	V	S
Template Known Secondary structure		S																						T										.	.	.	.	.	.	.	.	.	.			T	T	S																		.	.	T	T			S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.																							.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.											.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.							.	.	.	.	.	.	.						.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.																						.	.	.	.	.	.								.	.	.	.	.												.	.	.	.	.	.	.	.
Query SS confidence																							.																						.	.	.	.	.	.								.	.	.	.	.												.	.	.	.	.	.	.	.
Query Sequence		R	Y	Q	D	H	M	I	N	T	L	A	D	A	R	R	Y	I	V	E	N	D	.	L	K	H	V	Q	I	I	G	D	F	Y	H	M	N	I	E	E	D	N	L	A	.	.	.	.	.	.	Q	A	L	H	D	N	R	.	.	.	.	.	D	L	L	G	H	V	H	I	A	D	N	.	.	.	.	.	.	.	.
Query Conservation																							.																						.	.	.	.	.	.								.	.	.	.	.												.	.	.	.	.	.	.	.
Alig confidence																							.																						.	.	.	.	.	.								.	.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	K	G	G	N	I	G	Y	K	L	E	Q	L	K	K	I	R	D	L	V	D	Q	R	D	R	V	A	I	T	Y	D	T	C	H	G	F	D	S	G	Y	D	I	T	K	K	E	G	V	E	A	L	L	N	E	I	E	S	L	F	G	L	E	R	L	K	M	I	H	L	N	D	S	K	Y	P	L	G	A	A	K
Template Known Secondary structure				T	T				S	S												S		G	G	G													T	T			T	T	S															T		G	G	G										S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure		.																											.
Query SS confidence		.																											.
Query Sequence		.	H	R	Y	Q	P	G	S	G	T	L	D	F	H	A	L	F	E	Q	L	R	A	D	N	Y	Q	G	.	Y	V	V	Y	E	G	R	I	R	A	E	D	P	A	Q	A	Y	R	D	S	L	A	W	L	R
Query Conservation		.																											.
Alig confidence		.																											.
Template Conservation
Template Sequence		D	R	H	E	R	I	G	S	G	F	I	G	E	E	G	F	A	V	F	F	S	F	K	E	I	Q	E	V	P	W	I	L	E	T	P	G	G	N	E	E	H	A	E	D	I	K	K	V	F	E	I	I	E
Template Known Secondary structure							T	T	S	S	S	S										T						T	S							S	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions