Job Description P76044 Confidence 29.65% Date Thu Jan 5 12:17:47 GMT 2012 Rank 439 Aligned Residues 191 % Identity 10% Template c2w9mB_ PDB info PDB header:dna replication Chain: B: PDB Molecule:polymerase x; PDBTitle: structure of family x dna polymerase from deinococcus2 radiodurans Resolution 2.46 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	N	N	I	E	E	V	K	A	A	I	K	E	T	G	L	P	V	T	T	A	C	G	G	Y	D	G	W	I	G	D	F	I	E	E	R	R	L	N	G	L	K	Q	I	E	R	I	L	E	A	L	A	E	V	G	G	K	G	I	V	V	P	A	A	W	G	M	F	T	F	R	L	P	P	M	T	S	P	R
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	H	F	A	G	Q	V	Q	A	A	A	Q	A	R	G	F	T	L	T	A	G	G	L	S	R	G	D	E	V	L	P	T	P	T	E	A	.	.	.	.	.	.	.	.	.	.	.	.	V	V	F	H	A	L	D	L	P	F	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	E
Template Known Secondary structure															T	T	T					T	T					T	T							S			.	.	.	.	.	.	.	.	.	.	.	.						T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.													.	290	.	.	.	.	.	.	.	.	.																		300	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	D	G	D	R	K	M	V	S	D	S	L	R	V	L	E	Q	V	A	A	R	T	G	T	V	V	Y	L	E	P	L	N	R	Y	Q	D	H	M	I	N	T	L	A	D	A	R	R	Y	I	V	E	N	D	L	K	H	V	Q	I	I	G	D	F	Y	H	M	N	I	E	E	D	N	L	A	Q	A	L	H	D
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		Y	R	E	P	E	H	D	D	L	W	Q	T	L	P	D	P	A	E	L	V	T	V	G	D	L	R	G	M	I	H	T	H	S	T	W	S	D	G	G	.	A	S	I	R	E	M	A	E	A	T	L	T	L	G	H	E	F	L	G	T	A	D	H	S	R	A	A	Y	Y	A	N	G	L	T	I	E	R	L	R	E
Template Known Secondary structure		G		S	G	G	G	T	T	T	T	T	T	S			G	G	G	S			G	G	G										T	T	T	T		S	.	S												T	T		S								B	T	T		G	G	G	T		B
Template Predicted Secondary structure																																									.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		197	.	.	200	.	.	.	.	.	.	.	.							.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		N	R	D	L	L	G	H	V	H	I	A	D	.	.	.	.	.	.	N	H	R	Y	Q	P	G	S	G	T	L	D	F	H	A	L	F	E	Q	L	R	A	D	N	Y	Q	G	Y	V	V	Y	E	G	R	I	R	A	E	D	P	A	Q	A	Y	R	D	S	L	A	W	L	R	T
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																.	.						.	.
Template Conservation																																			.	.						.	.
Template Sequence		Q	L	K	E	I	R	E	L	Q	R	A	G	L	P	I	V	A	G	S	E	V	D	I	L	D	D	G	S	L	D	F	P	D	.	.	D	V	L	G	E	.	.	L	D	Y	V	V	V	S	V	H	S	N	F	T	L	D	A	A	R	Q	T	E	R	L	I	R	A	V	S	H
Template Known Secondary structure												T	T											B		T	T	S		B	S	S			.	.				T	T	.	.	S	S								S		T	T	S														T
Template Predicted Secondary structure																																			.	.						.	.
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.			.	.	.	.	.			420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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