Job Description P76044 Confidence 64.27% Date Thu Jan 5 12:17:47 GMT 2012 Rank 206 Aligned Residues 190 % Identity 17% Template c2v82A_ PDB info PDB header:lyase Chain: A: PDB Molecule:2-dehydro-3-deoxy-6-phosphogalactonate aldolase; PDBTitle: kdpgal complexed to kdpgal Resolution 2.1 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	I	G	T	Q	N	Q	A	F	F	P	E	N	I	L	E	K	F	R	Y	I	K	E	M	G	F	D	G	F	E	I	D	G	K	L	L	V	N	N	I	E	E	V	K	A	A	I	K	E	T	G	L	P	V	T	T	A	C	G	G	Y	D	G	W	I	G	D	F	I	E	E	R	R	L	N	G	L	K	Q
Query Conservation
Alig confidence																																				.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	L	I	A	I	L	R	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	L	.	N	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	V	L	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S							T	T																	T								T	.	T	S	T	T													T	T	T	S									S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	R	I	L	E	A	L	A	E	V	G	G	K	G	I	V	V	P	A	A	W	G	M	F	T	F	R	L	P	P	M	T	S	P	R	S	L	D	G	D	R	K	M	V	S	D	S	L	R	V	L	E	Q	V	A	A	R	T	G	T	V	V	Y	L	E	P	L	N	R	Y	Q	D	H	M	I	N	T	L	A
Query Conservation
Alig confidence		.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation		.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Sequence		.	.	E	Q	V	D	A	L	A	R	X	G	C	Q	L	I	V	T	P	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	E	V	I	R	R	A	V	G	Y	G	X	T	V	C	P	G	.	.	.	.	.	.	.	.	.	C	A	T	A	T
Template Known Secondary structure		.	.									T	T							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T							.	.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure		.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template SS confidence
				71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.																												90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.										.	.	110	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	R	R	Y	I	V	E	N	D	L	K	H	V	Q	I	I	G	D	F	Y	H	M	N	I	E	E	D	N	L	A	Q	A	L	H	D	N	R	D	L	L	G	H	V	H	I	A	D	N	H	R	Y	Q	P	G	S	G	T	L	D	F	H	A	L	F	E	Q	L	R	A	D	N	Y	Q	G	Y	V	V	Y	E
Query Conservation
Alig confidence										.								.	.	.																											.	.	.	.	.	.	.	.	.	.																.
Template Conservation										.								.	.	.																											.	.	.	.	.	.	.	.	.	.																.
Template Sequence		E	A	F	T	A	L	E	A	.	G	A	Q	A	L	K	I	.	.	.	F	P	S	S	A	F	G	P	Q	Y	I	K	A	L	K	A	V	L	P	S	D	I	A	V	F	A	.	.	.	.	.	.	.	.	.	.	V	G	G	V	T	P	E	N	L	A	Q	W	I	D	A	.	G	C	A	G	A	G	L	G	S
Template Known Secondary structure									T	.	T		S					.	.	.	T	T														T	T	S		T	T						.	.	.	.	.	.	.	.	.	.		S	S			T	T	T								.	T		S						T
Template Predicted Secondary structure										.								.	.	.																											.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		113	.	.	.	.	.	.	120		.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.											.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	I	R	A	E	D	P	A	Q	A	Y	R	D	S	L	A	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	Y	R	A	G	Q	S	V	E	R	T	A	Q	Q	A	A	A	F
Template Known Secondary structure		T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions