Job Description P76044 Confidence 99.82% Date Thu Jan 5 12:17:47 GMT 2012 Rank 36 Aligned Residues 252 % Identity 13% Template c2i56A_ PDB info PDB header:isomerase, metal-binding protein Chain: A: PDB Molecule:l-rhamnose isomerase; PDBTitle: crystal structure of l-rhamnose isomerase from pseudomonas2 stutzeri with l-rhamnose Resolution 1.97 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.						.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	G	T	Q	N	Q	A	F	F	P	E	N	I	L	E	K	F	R	Y	I	K	E	M	.	.	.	.	.	G	F	D	G	F	E	I	D	G	K	L	L	V	N	N	I	E	E	V	K	A	A	I	K	E	T	G	L	P	V	T	T	A	C	G	G	Y	D	G	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																										.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	F	A	R	F	P	G	T	G	E	P	R	G	I	F	D	K	L	D	D	C	A	V	I	Q	Q	L	T	R	A	T	P	N	V	S	L	H	I	P	W	D	K	A	D	P	K	E	L	K	A	R	G	D	A	L	G	L	G	F	D	A	M	N	S	N	T	F	S	D	A	P	G	Q	A	H	S	Y	K	Y	G
Template Known Secondary structure		S	S		B				S	S				S																S								B	T	T	T	T		S													T											S	S			T	T		S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	I	G	D	F	I	E	E	R	R	L	N	G	L	K	Q	I	E	R	I	L	E	A	L	A	E	V	G	G	K	G	I	V	V	P	A	A	W	G	M	F	T	F	R	L	P	P	M	T	S	P	R	S	L	D	G	D	R	K	M	V	S	D	S	L	R	V	L	E	Q	V	A	A	R	T	G	T	V	V	Y
Query Conservation
Alig confidence																																							.				.	.	.	.	.																										.
Template Conservation																																							.				.	.	.	.	.																										.
Template Sequence		S	L	S	H	T	N	A	A	T	R	A	Q	A	V	E	H	N	L	E	C	I	E	I	G	K	A	I	G	S	K	A	L	T	V	W	I	G	.	D	G	S	.	.	.	.	.	N	F	P	G	Q	S	N	F	T	R	A	F	E	R	Y	L	S	A	M	A	E	I	Y	K	G	.	L	P	D	D	W	K	L	F
Template Known Secondary structure		S	T	T		S	S																						T										.				.	.	.	.	.	S	S	T	T	S	S																			T	.			T	T
Template Predicted Secondary structure																																							.				.	.	.	.	.																										.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.						.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.
Predicted Secondary structure											.	.	.																																														.	.																			.	.
Query SS confidence											.	.	.																																														.	.																			.	.
Query Sequence		L	E	P	L	N	R	Y	Q	D	.	.	.	H	M	I	N	T	L	A	D	A	R	R	Y	I	V	E	N	D	L	K	H	V	Q	I	I	G	D	F	Y	H	M	N	I	E	E	D	N	L	A	Q	A	L	H	D	N	R	.	.	D	L	L	G	H	V	H	I	A	D	N	H	R	Y	Q	P	G	S	.	.	G
Query Conservation											.	.	.																																														.	.																			.	.
Alig confidence											.	.	.																		.												.																.	.																			.	.
Template Conservation																															.												.
Template Sequence		S	E	H	K	M	Y	E	P	A	F	Y	S	T	V	V	Q	D	W	G	T	N	Y	L	I	A	Q	T	L	G	.	P	K	A	Q	C	L	V	D	L	G	H	.	H	A	P	N	T	N	I	E	M	I	V	A	R	L	I	Q	F	G	K	L	G	G	F	H	F	N	D	S	K	Y	G	D	D	D	L	D	A	G
Template Known Secondary structure						S	S	S	S		S	S			T	T		S													.	T	T							G	G	G	.	S		T	T													T	T									B		S	S	S	S			B		T	T
Template Predicted Secondary structure																															.												.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		218	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.							.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure					.	.	.																	.	.	.	.	.	.
Query SS confidence					.	.	.																	.	.	.	.	.	.
Query Sequence		T	L	D	.	.	.	F	H	A	L	F	E	Q	L	R	A	D	N	Y	Q	G	Y	.	.	.	.	.	.	V	V	Y	E	G	R	I	R	A	E	D	P	A	Q	A	Y	R	D	S	L	A	W	L	R	T	C
Query Conservation					.	.	.																	.	.	.	.	.	.
Alig confidence					.	.	.																	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	E	P	Y	R	L	F	L	V	F	N	E	L	V	D	A	E	A	R	G	V	K	G	F	H	P	A	H	M	I	D	Q	S	H	N	V	T	D	P	I	E	S	L	I	N	S	A	N	E	I	R	R	A
Template Known Secondary structure		S	S																		T	T		T	T												S	S	S
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions